RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 B8ZZF3 427 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 PQBP1O60828 265 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 WBP4O75554 376 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 PRDX3P30048 256 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 CCR1P32246 355 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 STC1P52823 247 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 SOX4Q06945 474 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 TSNQ15631 228 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 BCL7AQ4VC05 210 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 ARMCX4Q5H9R4 360 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 FBXO46Q6PJ61 603 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 TRAF7Q6Q0C0 670 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 SCIMPQ6UWF3 145 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 RNF165Q6ZSG1 346 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 SH3RF2Q8TEC5 729 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 SLC7A6Q92536 515 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 FAM120BQ96EK7 910 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 CRELD1Q96HD1 420 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 SDHCQ99643 169 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 TRAF4Q9BUZ4 470 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 MIR1-1HGQ9H1L0 117 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 FKBP14Q9NWM8 211 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 VNN3Q9NY84 501 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 PSORS1C1Q9UIG5 152 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 U3KQV3 271 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 TRBV5-3A0A0A0MS03 114 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 LDB2O43679 373 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 ERN1O75460 977 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 CDK1P06493 297 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 USP17L7P0C7H9 530 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 MLLT3P42568 568 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 ATN1P54259 1190 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 PARP15Q460N3 678 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 ARMC4Q5T2S8 1044 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 BHLHA9Q7RTU4 235 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 RTL3Q8N8U3 475 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 C9orf43Q8TAL5 461 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 MARVELD3Q96A59 401 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 CEP295NLQ96MC4 621 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 COL21A1Q96P44 957 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 ACOX2Q99424 681 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 RHNO1Q9BSD3 238 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 ASIC5Q9NY37 505 aa14.87□□□□□ -0.03
CLSTN1-205ENST00000477264 KRT87PA6NCN2 255 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 WASH4PA8MWX3 477 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 ERVH48-1M5A8F1 160 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 E2F3O00716 465 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 WNT9AO14904 365 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 STX7O15400 261 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 ARHGEF9O43307 516 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 DPM1O60762 260 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 TRIM3O75382 744 aaPredicted RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 IGLV3-25P01717 112 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 UBL4AP11441 157 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 CD72P21854 359 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 ERP29P30040 261 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 HOXA9P31269 272 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 TSPY1Q01534 308 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 IL1RL1Q01638 556 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 PPP1R8Q12972 351 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 TARDBPQ13148 414 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 MBTPS1Q14703 1052 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 SMN1Q16637 294 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 AAK1Q2M2I8 961 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 HABP4Q5JVS0 413 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 NXNL2Q5VZ03 156 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 ZNF367Q7RTV3 350 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 KRT73Q86Y46 540 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 PLCZ1Q86YW0 608 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 ITCHQ96J02 903 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 SMOQ99835 787 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 CPPED1Q9BRF8 314 aaPredicted RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 GABARAPL3Q9BY60 117 aa14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 OLA1Q9NTK5 396 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-205ENST00000477264 MEIOCA2RUB1 952 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 OR51F1A6NGY5 319 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 ZSCAN5BA6NJL1 495 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 ARHGAP33O14559 1287 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 CCNDBP1O95273 360 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 CA5AP35218 305 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 CD86P42081 329 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 PXNP49023 591 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 NRG1Q02297 640 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 ABHD18Q0P651 414 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 EIF4HQ15056 248 aaKnown RBP14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 AP5B1Q2VPB7 878 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 GPAT3Q53EU6 434 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 INO80DQ53TQ3 878 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 SIRPB2Q5JXA9 342 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 PIK3R6Q5UE93 754 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 TIGD3Q6B0B8 471 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 FAHD1Q6P587 224 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 IL27RAQ6UWB1 636 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 IDO2Q6ZQW0 420 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 SLC24A5Q71RS6 500 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 ZNF767PQ75MW2 155 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 NRARPQ7Z6K4 114 aa14.85□□□□□ -0.03
CLSTN1-205ENST00000477264 MSRB3Q8IXL7 192 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms