RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TLK1Q9UKI8 766 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 SHANK1Q9Y566 2161 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 ST14Q9Y5Y6 855 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 LOC101059948A0A1B0GTJ6 334 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 KLHL33A6NCF5 533 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 K7EM74 188 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 LIN7AO14910 233 aaPredicted RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 ATP8B1O43520 1251 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 KCNJ13O60928 360 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 GPC4O75487 556 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 LDLRP01130 860 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 CCDC166P0CW27 439 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 PYGBP11216 843 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ZNF37AP17032 561 aaPredicted RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 PDHA2P29803 388 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ACTR1BP42025 376 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ACTR1AP61163 376 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 DMPKQ09013 629 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ILF3Q12906 894 aaKnown RBP eCLIP11.21□□□□□ -0.612e-7■■□□□ 14.4
LSM2-212ENST00000477182 LRP8Q14114 963 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 GBX1Q14549 363 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 EIF2S3LQ2VIR3 472 aaKnown RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 AMZ1Q400G9 498 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 TNFAIP8L3Q5GJ75 292 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 METRNLQ641Q3 311 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 SLC30A9Q6PML9 568 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 TAF8Q7Z7C8 310 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 NRROSQ86YC3 692 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 C4orf33Q8N1A6 199 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 PRR7Q8TB68 274 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ACMSDQ8TDX5 336 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 EEF1AKMT1Q8WVE0 214 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ANKRD49Q8WVL7 239 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 LINGO1Q96FE5 620 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 DPYSL5Q9BPU6 564 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 NUDT22Q9BRQ3 303 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ZPBPQ9BS86 351 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 UNKQ9C0B0 810 aaKnown RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 STMN4Q9H169 189 aaPredicted RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 SYTL2Q9HCH5 934 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 PSMD13Q9UNM6 376 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.61
LSM2-212ENST00000477182 CDYLQ9Y232 598 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ACOT9Q9Y305 439 aa11.21□□□□□ -0.61
LSM2-212ENST00000477182 ADGRG4Q8IZF6 3080 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 A0A087X1B8 175 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 RHPN2P1A8MT19 583 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 B4DGG1 531 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 HNRNPRO43390 633 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 B4GAT1O43505 415 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 SNX2O60749 519 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 SLCO2B1O94956 709 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 TSPAN12O95859 305 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CBSLP0DN79 551 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CREB1P16220 341 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 KRT4P19013 534 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 IDSP22304 550 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 RPL10P27635 214 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 ALDH4A1P30038 563 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 ATP5DP30049 168 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CBSP35520 551 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CCNFP41002 786 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 RGS4P49798 205 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CLCNKAP51800 687 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 IL2P60568 153 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 DLG1Q12959 904 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CSHL1Q14406 222 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 SEPT7Q16181 437 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 TTMPQ5BVD1 217 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 AGBL2Q5U5Z8 902 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 SH2D5Q6ZV89 423 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 PIWIL4Q7Z3Z4 852 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 CCDC91Q7Z6B0 441 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 TBC1D1Q86TI0 1168 aaPredicted RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 FAM129CQ86XR2 697 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 SLC22A15Q8IZD6 547 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CENPLQ8N0S6 344 aaPredicted RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 PLD6Q8N2A8 252 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 NKAPQ8N5F7 415 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 OR4D9Q8NGE8 314 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 KCTD4Q8WVF5 259 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 SKA2Q8WVK7 121 aaPredicted RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 TLCD1Q96CP7 247 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CABS1Q96KC9 395 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 GSDMCQ9BYG8 508 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 WWP1Q9H0M0 922 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 OR52A5Q9H2C5 316 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 DPEP2Q9H4A9 486 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 ACSL5Q9ULC5 683 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 RUVBL2Q9Y230 463 aaKnown RBP11.2□□□□□ -0.62
LSM2-212ENST00000477182 POLHQ9Y253 713 aa11.2□□□□□ -0.62
LSM2-212ENST00000477182 CELSR1Q9NYQ6 3014 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 APCP25054 2843 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 PDZK1P1A8MUH7 402 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms