RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 COLEC10Q9Y6Z7 277 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 TRBV23OR9-2A0A075B6M9 112 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 CAPN14A8MX76 684 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 PRR5-ARHGAP8B1AHC4 643 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 MANBAO00462 879 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 UGDHO60701 494 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 CBX6O95503 412 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 GNAZP19086 355 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 PKLRP30613 574 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 PCDH1Q08174 1060 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 DOC2AQ14183 400 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 LIPJQ5W064 366 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 TAF8Q7Z7C8 310 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 TMPRSS11BQ86T26 416 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.9■■■□□ 2.067e-15■■■□□ 17.8
VEGFA-211ENST00000476772 LINC01555Q8NAE3 123 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 MAGEB10Q96LZ2 347 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-211ENST00000476772 ZNF385DQ9H6B1 395 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 ARL8BQ9NVJ2 186 aa27.9■■■□□ 2.06
VEGFA-211ENST00000476772 MUC3AQ02505 3323 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 CSF2P04141 144 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 JUPP14923 745 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 RAB28P51157 221 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 ZRSR2Q15696 482 aaKnown RBP27.89■■■□□ 2.06
VEGFA-211ENST00000476772 PRRT3Q5FWE3 981 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 LCTLQ6UWM7 567 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 CHSY3Q70JA7 882 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 SETD7Q8WTS6 366 aaKnown RBP27.89■■■□□ 2.06
VEGFA-211ENST00000476772 USP7Q93009 1102 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 CXorf40BQ96DE9 158 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 KIR3DX1Q9H7L2 352 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 SLC12A4Q9UP95 1085 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 ICKQ9UPZ9 632 aa27.89■■■□□ 2.06
VEGFA-211ENST00000476772 VPS4BO75351 444 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 ULK1O75385 1050 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 KRT6AP02538 564 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 KRT6BP04259 564 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 NME1P15531 152 aaKnown RBP27.88■■■□□ 2.05
VEGFA-211ENST00000476772 SLC19A1P41440 591 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 KRT6CP48668 564 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 NXPH1P58417 271 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 KRT72Q14CN4 511 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 SGO1Q5FBB7 561 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 SLCO4C1Q6ZQN7 724 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 RNF165Q6ZSG1 346 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 Q6ZSR9 355 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 SMPDL3AQ92484 453 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 RAB11FIP5Q9BXF6 653 aa27.88■■■□□ 2.05
VEGFA-211ENST00000476772 ZNF490Q9ULM2 529 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-211ENST00000476772 TDRD6O60522 2096 aaKnown RBP27.88■■■□□ 2.05
VEGFA-211ENST00000476772 UBDO15205 165 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 BCAT2O15382 392 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 T-ENOLP0DO92 83 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 VARSP26640 1264 aaKnown RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 NDUFS1P28331 727 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 CSNK1EP49674 416 aaKnown RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 CATSPEREQ5SY80 951 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 GRHL2Q6ISB3 625 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 IYDQ6PHW0 289 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 SLC5A11Q8WWX8 675 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 MTFMTQ96DP5 389 aaKnown RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 ACAT2Q9BWD1 397 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 RIC8BQ9NVN3 520 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 SNX6Q9UNH7 406 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 A0A1W2PPV9 198 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 ANKRD65E5RJM6 399 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 PRR35P0CG20 571 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 LBPP18428 481 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 CPSF7Q8N684 471 aaKnown RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 OR2L8Q8NGY9 312 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 PATE1Q8WXA2 126 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 JPH3Q8WXH2 748 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 SH3KBP1Q96B97 665 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 HAUS8Q9BT25 410 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 ELOVL6Q9H5J4 265 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 TAC3Q9UHF0 121 aa27.87■■■□□ 2.05
VEGFA-211ENST00000476772 COPG1Q9Y678 874 aaKnown RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 ARHGEF17Q96PE2 2063 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-211ENST00000476772 SPAG17Q6Q759 2223 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 VILLO15195 856 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 PEX11AO75192 247 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 ALDOCP09972 364 aaKnown RBP27.86■■■□□ 2.05
VEGFA-211ENST00000476772 CASP2P42575 452 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 E2F2Q14209 437 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 TBCCQ15814 346 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 SFRP1Q8N474 314 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 HMGCLL1Q8TB92 370 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 GAB3Q8WWW8 586 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 SELENOMQ8WWX9 145 aa27.86■■■□□ 2.05
VEGFA-211ENST00000476772 PDYNP01213 254 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 PSMB5P28074 263 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 HNF4AP41235 474 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 DHPSP49366 369 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-211ENST00000476772 AFF3P51826 1226 aaKnown RBP27.85■■■□□ 2.05
VEGFA-211ENST00000476772 LYSMD4Q5XG99 296 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 PMS2CLQ68D20 193 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 SFTPA2Q8IWL1 248 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 HOMEZQ8IX15 550 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 DTWD2Q8NBA8 298 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 PTCD3Q96EY7 689 aaKnown RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms