RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 DNAJC22Q8N4W6 341 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 C2orf73Q8N5S3 287 aaPredicted RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 ZNF655Q8N720 491 aaPredicted RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 C2CD4AQ8NCU7 369 aaPredicted RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 OR2L3Q8NG85 312 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 FLVCR1-AS1Q8TAF5 88 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 FAM45AQ8TCE6 357 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 RNF31Q96EP0 1072 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 CFAP36Q96G28 342 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 HIST1H2AHQ96KK5 128 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 KRT12Q99456 494 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 GPR21Q99679 349 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 MIPEPQ99797 713 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 HIST1H2AJQ99878 128 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 SELENOSQ9BQE4 189 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 TRIM56Q9BRZ2 755 aaKnown RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 AARSD1Q9BTE6 412 aaKnown RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 H2AFJQ9BTM1 129 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 MENTQ9BUN1 341 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 TRIM54Q9BYV2 358 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 SEMA4CQ9C0C4 833 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 PCBD2Q9H0N5 130 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 FAM60AQ9NP50 221 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 MRPS30Q9NP92 439 aaKnown RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 ACSS2Q9NR19 701 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 ZFATQ9P243 1243 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 IFT80Q9P2H3 777 aaPredicted RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 CIDEBQ9UHD4 219 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 ANAPC2Q9UJX6 822 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 TCFL5Q9UL49 500 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 CHMP2BQ9UQN3 213 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 UTP11Q9Y3A2 253 aaKnown RBP9.82□□□□□ -0.84
CCM2-208ENST00000476594 KCNMB2Q9Y691 235 aa9.82□□□□□ -0.84
CCM2-208ENST00000476594 A0A1B0GX78 115 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ARHGEF33A8MVX0 844 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 J3QKU1 62 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 PEX12O00623 359 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 SLC16A5O15375 505 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 HAUS5O94927 633 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ERGP11308 486 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ALAS2P22557 587 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 CCND1P24385 295 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 HRH2P25021 359 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ELK3P41970 407 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 CARSP49589 748 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 PNLIPRP1P54315 467 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ETF1P62495 437 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 MPP1Q00013 466 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 CKAP4Q07065 602 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 CUL1Q13616 776 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 FRG1Q14331 258 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 ZIC1Q15915 447 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 PTCHD3Q3KNS1 767 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ZNF789Q5FWF6 425 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 MLIPQ5VWP3 458 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 TCTN3Q6NUS6 607 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 FAM198BQ6UWH4 519 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 UBE2R2Q712K3 238 aaPredicted RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 MED25Q71SY5 747 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 TMEM102Q8N9M5 508 aaPredicted RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 CD200R1Q8TD46 325 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ASB11Q8WXH4 323 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 CDKL2Q92772 493 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 RERGQ96A58 199 aaPredicted RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 FKBP10Q96AY3 582 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 NACC2Q96BF6 587 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 FER1L6-AS2Q96M78 137 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 NRTNQ99748 197 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ZFYVE21Q9BQ24 234 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 TRIM31Q9BZY9 425 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 RAB17Q9H0T7 212 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 TXNDC16Q9P2K2 825 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 NXT1Q9UKK6 140 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 RUVBL2Q9Y230 463 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 KLK4Q9Y5K2 254 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 ZNF462Q96JM2 2506 aa9.81□□□□□ -0.84
CCM2-208ENST00000476594 TLN1Q9Y490 2541 aaKnown RBP9.81□□□□□ -0.84
CCM2-208ENST00000476594 DSCR3O14972 297 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 EIF3HO15372 352 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCM2-208ENST00000476594 ALBP02768 609 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 PLA2G2AP14555 144 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 EZRP15311 586 aaKnown RBP9.8□□□□□ -0.84
CCM2-208ENST00000476594 MCM3P25205 808 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 IVDP26440 423 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 GRIA3P42263 894 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 GABRA4P48169 554 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 IL2P60568 153 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 RPS18P62269 152 aaKnown RBP9.8□□□□□ -0.84
CCM2-208ENST00000476594 CAV1Q03135 178 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 PDIA2Q13087 525 aaKnown RBP9.8□□□□□ -0.84
CCM2-208ENST00000476594 SSPNQ14714 243 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 KCTD19Q17RG1 926 aaPredicted RBP9.8□□□□□ -0.84
CCM2-208ENST00000476594 MUM1Q2TAK8 710 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.8□□□□□ -0.84
CCM2-208ENST00000476594 ATP1A1-AS1Q5TC04 95 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 PRAMEF17Q5VTA0 474 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 C1orf189Q5VU69 101 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 PRMT9Q6P2P2 845 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
CCM2-208ENST00000476594 RNF44Q7L0R7 432 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms