RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 RASGRP3Q8IV61 690 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
PGK1-203ENST00000476531 ANKRD42Q8N9B4 389 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 RASGEF1AQ8N9B8 481 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 BANPQ8N9N5 519 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 SIDT2Q8NBJ9 832 aaKnown RBP10.22□□□□□ -0.77
PGK1-203ENST00000476531 DDHD1Q8NEL9 900 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 GDAP1Q8TB36 358 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 KCTD4Q8WVF5 259 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 ANKRD49Q8WVL7 239 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 KLHL6Q8WZ60 621 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 RSC1A1Q92681 617 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.22□□□□□ -0.77
PGK1-203ENST00000476531 ULK4Q96C45 1275 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 MTBPQ96DY7 904 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 TCF12Q99081 682 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 COPS8Q99627 209 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 GPR21Q99679 349 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 ZSCAN5AQ9BUG6 496 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 TRIM55Q9BYV6 548 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 TWSG1Q9GZX9 223 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 OR2AG1Q9H205 316 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 RAD18Q9NS91 495 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 SLC17A7Q9P2U7 560 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 TSR3Q9UJK0 312 aaKnown RBP10.22□□□□□ -0.77
PGK1-203ENST00000476531 KCND3Q9UK17 655 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 IKZF3Q9UKT9 509 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 EMCNQ9ULC0 261 aa10.22□□□□□ -0.77
PGK1-203ENST00000476531 TMEM120BA0PK00 339 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 PIPSLA2A3N6 862 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 PRMT5O14744 637 aaPredicted RBP10.21□□□□□ -0.77
PGK1-203ENST00000476531 VPS4BO75351 444 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 AGFG2O95081 481 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 TIAF1O95411 115 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 VIPP01282 170 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 RNF224P0DH78 156 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 AMD1P17707 334 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 RPS3P23396 243 aaKnown RBP eCLIP10.21□□□□□ -0.774e-26■■■■■ 41.6
PGK1-203ENST00000476531 TYK2P29597 1187 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 RPA3P35244 121 aaPredicted RBP10.21□□□□□ -0.77
PGK1-203ENST00000476531 CAPZBP47756 277 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 RAB10P61026 200 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 PPP2R2AP63151 447 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 POU4F1Q01851 419 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 GPS2Q13227 327 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 ITIH4Q14624 930 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 PLA2G4EQ3MJ16 856 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
PGK1-203ENST00000476531 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.77
PGK1-203ENST00000476531 FHL5Q5TD97 284 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 LGSNQ5TDP6 509 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 FAM45BPQ6NSW5 357 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 CRTC3Q6UUV7 619 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 CERS6Q6ZMG9 384 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 CENPLQ8N0S6 344 aaPredicted RBP10.21□□□□□ -0.77
PGK1-203ENST00000476531 FAM45AQ8TCE6 357 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 MGARPQ8TDB4 240 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 DTX3LQ8TDB6 740 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 APOPT1Q96IL0 206 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 VPS35Q96QK1 796 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 SMC6Q96SB8 1091 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 OSGEPL1Q9H4B0 414 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 AKIRIN1Q9H9L7 192 aaPredicted RBP10.21□□□□□ -0.77
PGK1-203ENST00000476531 TRIM39Q9HCM9 518 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 KCNK9Q9NPC2 374 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 LHX9Q9NQ69 397 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 LNPEPQ9UIQ6 1025 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 PADI1Q9ULC6 663 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 VPS4AQ9UN37 437 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 VWA7Q9Y334 891 aa10.21□□□□□ -0.77
PGK1-203ENST00000476531 PIKFYVEQ9Y2I7 2098 aa10.21□□□□□ -0.78
PGK1-203ENST00000476531 CRYBG3Q68DQ2 2970 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 OR2AG2A6NM03 316 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 TTLL8A6PVC2 850 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 GPR89AB7ZAQ6 455 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 C21orf140B9A014 251 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 SEMA7AO75326 666 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 RASSF9O75901 435 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 SORBS2O94875 1100 aaKnown RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 SLC25A14O95258 325 aaPredicted RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 ESR1P03372 595 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 GPR89BP0CG08 455 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 STMN1P16949 149 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 ZNF7P17097 686 aaPredicted RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 NELFEP18615 380 aaKnown RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 MSH3P20585 1137 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 ATP5DP30049 168 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 CLCN7P51798 805 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 WDR4P57081 412 aaKnown RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 PPP1CAP62136 330 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 UGT8Q16880 541 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 NADK2Q4G0N4 442 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 CACHD1Q5VU97 1274 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 LYPLAL1Q5VWZ2 237 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 CPZQ66K79 652 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 TTC19Q6DKK2 380 aaPredicted RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 PTRHD1Q6GMV3 140 aaKnown RBP10.2□□□□□ -0.78
PGK1-203ENST00000476531 PAQR3Q6TCH7 311 aa10.2□□□□□ -0.78
PGK1-203ENST00000476531 ABRAXAS1Q6UWZ7 409 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms