RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SLC39A10Q9ULF5 831 aa12.04□□□□□ -0.48
SKA3-206ENST00000475251 MRFAP1Q9Y605 127 aa12.04□□□□□ -0.48
SKA3-206ENST00000475251 ALG6Q9Y672 507 aa12.04□□□□□ -0.48
SKA3-206ENST00000475251 MAU2Q9Y6X3 613 aa12.04□□□□□ -0.48
SKA3-206ENST00000475251 SVILO95425 2214 aa12.04□□□□□ -0.48
SKA3-206ENST00000475251 F8P00451 2351 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 HYKKA2RU49 373 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 PRPF4O43172 522 aaKnown RBP eCLIP12.03□□□□□ -0.48
SKA3-206ENST00000475251 BMP10O95393 424 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 MLYCDO95822 493 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 PRR35P0CG20 571 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 RBP3P10745 1247 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 ESRRAP11474 423 aaPredicted RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 MCM3P25205 808 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 HADHBP55084 474 aaKnown RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 NAA25Q14CX7 972 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 LONRF1Q17RB8 773 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 MUM1Q2TAK8 710 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 ATG9BQ674R7 924 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 DARS2Q6PI48 645 aaKnown RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 FIGLAQ6QHK4 219 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 FAM20CQ8IXL6 584 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 PIANPQ8IYJ0 282 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 SLC22A15Q8IZD6 547 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 METTL27Q8N6F8 245 aaPredicted RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 OR2L8Q8NGY9 312 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 ACTL9Q8TC94 416 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 BRIX1Q8TDN6 353 aaKnown RBP12.03□□□□□ -0.48
SKA3-206ENST00000475251 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 HEMGNQ9BXL5 484 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 TRIM8Q9BZR9 551 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 LRRC40Q9H9A6 602 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 ABHD10Q9NUJ1 306 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 TEKT2Q9UIF3 430 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 KLHL20Q9Y2M5 609 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 PDZD2O15018 2839 aa12.03□□□□□ -0.48
SKA3-206ENST00000475251 CNTRLQ7Z7A1 2325 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 ADGRG4Q8IZF6 3080 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 IGLV3-12A0A075B6K2 115 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 PRSS56P0CW18 603 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 ERVK-10P10266 1014 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 COX6A1P12074 109 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 ICAM2P13598 275 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 FBLP22087 321 aaKnown RBP12.02□□□□□ -0.49
SKA3-206ENST00000475251 PPARGP37231 505 aaPredicted RBP12.02□□□□□ -0.49
SKA3-206ENST00000475251 CETN2P41208 172 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 GRIA3P42263 894 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
SKA3-206ENST00000475251 HSPA14Q0VDF9 509 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 POU6F1Q14863 301 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 WASHC2DQ5SRD0 308 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 ABHD17BQ5VST6 288 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 KLHDC8BQ8IXV7 354 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 LINC01555Q8NAE3 123 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 PSMF1Q92530 271 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 C8orf44Q96CB5 159 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 MRFAP1L1Q96HT8 127 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 C10orf88Q9H8K7 445 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 RYDENQ9NUL5 291 aaKnown RBP12.02□□□□□ -0.49
SKA3-206ENST00000475251 C14orf105Q9NVL8 296 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 PLA2G3Q9NZ20 509 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 IMPACTQ9P2X3 320 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 SH3BGRL2Q9UJC5 107 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 CDC14AQ9UNH5 594 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 PRSS21Q9Y6M0 314 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 CSMD2Q7Z408 3487 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 MYO7BQ6PIF6 2116 aa12.02□□□□□ -0.49
SKA3-206ENST00000475251 SNRNP200O75643 2136 aaKnown RBP12.01□□□□□ -0.49
SKA3-206ENST00000475251 RASGRF2O14827 1237 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 PSMD3O43242 534 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 SLC19A2O60779 497 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 PRAMEF2O60811 474 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 APOA4P06727 396 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
SKA3-206ENST00000475251 EMP2P54851 167 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 VSX2P58304 361 aaPredicted RBP12.01□□□□□ -0.49
SKA3-206ENST00000475251 TMED2Q15363 201 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 PARP6Q2NL67 630 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 P3H1Q32P28 736 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 NAPRTQ6XQN6 538 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 SPNS3Q6ZMD2 512 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 ARHGEF18Q6ZSZ5 1173 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 PRSS58Q8IYP2 241 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 SIRT6Q8N6T7 355 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 GSDMBQ8TAX9 411 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 CHTF18Q8WVB6 975 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 RAD51AP1Q96B01 352 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 MVB12AQ96EY5 273 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 C14orf79Q96F83 325 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 MAGED4Q96JG8 741 aa12.01□□□□□ -0.49
SKA3-206ENST00000475251 CHP1Q99653 195 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms