RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ATG9BQ674R7 924 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 RAET1GQ6H3X3 334 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 CAPRIN2Q6IMN6 1127 aaKnown RBP9.52□□□□□ -0.89
USP39-214ENST00000474572 NOXRED1Q6NXP6 359 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SYCE2Q6PIF2 218 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ADAMTSL4Q6UY14 1074 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 GPR155Q7Z3F1 870 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 C11orf96Q7Z7L8 435 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 AMIGO2Q86SJ2 522 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 CALHM3Q86XJ0 350 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 EPHX4Q8IUS5 362 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ZNF547Q8IVP9 402 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 LRRC56Q8IYG6 542 aaPredicted RBP9.52□□□□□ -0.89
USP39-214ENST00000474572 TBC1D21Q8IYX1 336 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 OR2L2Q8NH16 312 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 CSGALNACT1Q8TDX6 532 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SUSD6Q92537 303 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 EME1Q96AY2 570 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 PPM1MQ96MI6 270 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 FOPNLQ96NB1 174 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ZNF583Q96ND8 569 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SH3GL1Q99961 368 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SGPP1Q9BX95 441 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 OSBPL11Q9BXB4 747 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 DPEP2Q9H4A9 486 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 GORASP2Q9H8Y8 452 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SIRT5Q9NXA8 310 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ATXN10Q9UBB4 475 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ANAPC2Q9UJX6 822 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 PPT2Q9UMR5 302 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 USP22Q9UPT9 525 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 EPOPA6NHQ4 379 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 EIF4E1BA6NMX2 242 aaKnown RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 E7EQ34 232 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 K7ESM1 405 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 CLGNO14967 610 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ACOX3O15254 700 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 MMP20O60882 483 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PRSS23O95084 383 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 KAT7O95251 611 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 SLC16A8O95907 504 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ANXA6P08133 673 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 SMIM18P0DKX4 95 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ERGP11308 486 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 IL1RNP18510 177 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PRPS1L1P21108 318 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 TACR1P25103 407 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PBX2P40425 430 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 GRIA2P42262 883 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 NEK2P51955 445 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 MTPNP58546 118 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PRKCQQ04759 706 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 RPA4Q13156 261 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 NAE1Q13564 534 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 GTF2H3Q13889 308 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 CYP51A1Q16850 503 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 HABP4Q5JVS0 413 aaKnown RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 C10orf62Q5T681 223 aaPredicted RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 FAM46CQ5VWP2 391 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 NAIF1Q69YI7 327 aaPredicted RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 GLYATQ6IB77 296 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ANKRD54Q6NXT1 300 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 UNC5DQ6UXZ4 953 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 CAMKMTQ7Z624 323 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 CARM1Q86X55 608 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 OXR1Q8N573 874 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 DTWD1Q8N5C7 304 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 KRTCAP2Q8N6L1 136 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 CXorf40AQ8TE69 158 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ZNF480Q8WV37 535 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 POP5Q969H6 163 aaKnown RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 FAM131CQ96AQ9 280 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ELSPBP1Q96BH3 223 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 BIRC7Q96CA5 298 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 MTFMTQ96DP5 389 aaKnown RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 CENPNQ96H22 339 aaPredicted RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 NSMCE2Q96MF7 247 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 TRAPPC9Q96Q05 1148 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 SLC29A1Q99808 456 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 C9orf16Q9BUW7 83 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PBX4Q9BYU1 374 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 OSBPL6Q9BZF3 934 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PLA2G2FQ9BZM2 168 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 SEMA6AQ9H2E6 1030 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ZNF696Q9H7X3 374 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ITM2CQ9NQX7 267 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 DYRK4Q9NR20 520 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 UBAP1Q9NZ09 502 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 ZNF639Q9UID6 485 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 PADI4Q9UM07 663 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 MAPRE3Q9UPY8 281 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 RUVBL1Q9Y265 456 aaKnown RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 TSC22D4Q9Y3Q8 395 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 GMEB1Q9Y692 573 aa9.51□□□□□ -0.89
USP39-214ENST00000474572 DNMT3AQ9Y6K1 912 aaPredicted RBP9.51□□□□□ -0.89
USP39-214ENST00000474572 TBC1D3BA6NDS4 549 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 MGAT4DA6NG13 374 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 PLK4O00444 970 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms