RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 C1GALT1Q9NS00 363 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 NSMCE4AQ9NXX6 385 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 ACSL6Q9UKU0 697 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 PDE10AQ9Y233 779 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 BTRCQ9Y297 605 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 A0A087WUV0 522 aaPredicted RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 C2orf74A8MZ97 194 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 H3BMH7 237 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 PHGDHO43175 533 aaKnown RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 SLC16A8O95907 504 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 RPN2P04844 631 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 ABHD2P08910 425 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 CDH3P22223 829 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 IMPA1P29218 277 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 CCNFP41002 786 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 PRKAA1Q13131 559 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 CLN3Q13286 438 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 NAB1Q13506 487 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 KIR2DS3Q14952 304 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 GPR19Q15760 415 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 SLC5A12Q1EHB4 618 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 PRAMEF17Q5VTA0 474 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 FCRL6Q6DN72 434 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 UGT3A1Q6NUS8 523 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 SUSD1Q6UWL2 747 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 SBSNQ6UWP8 590 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 CDHR3Q6ZTQ4 885 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 DTX1Q86Y01 620 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 SPATA6LQ8N4H0 392 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 OR2A1Q8NGT9 310 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 UHMK1Q8TAS1 419 aaKnown RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 ZNF501Q96CX3 271 aaPredicted RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 MRRFQ96E11 262 aaKnown RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 PDLIM5Q96HC4 596 aaKnown RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 FOPNLQ96NB1 174 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 DDA1Q9BW61 102 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 SLC12A9Q9BXP2 914 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
TPM3-216ENST00000473036 ACSS3Q9H6R3 686 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 SLC39A10Q9ULF5 831 aa12.64□□□□□ -0.39
TPM3-216ENST00000473036 MDC1Q14676 2089 aaKnown RBP12.63□□□□□ -0.39
TPM3-216ENST00000473036 IGKV1-8A0A0C4DH67 115 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 ISM1B1AKI9 464 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 E7ENX8 843 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 CDC7O00311 574 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 MATN2O00339 956 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 EFSO43281 561 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 CATP04040 527 aaKnown RBP12.63□□□□□ -0.39
TPM3-216ENST00000473036 FGF5P12034 268 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 GCAP28676 217 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 PNLIPRP1P54315 467 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 IL2P60568 153 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 HSD11B2P80365 405 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 POU4F1Q01851 419 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 TAP2Q03519 686 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 FOXM1Q08050 763 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 DLG1Q12959 904 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 ARMC6Q6NXE6 501 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 KMT5CQ86Y97 462 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 CARFQ8N187 725 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 CYTH2Q99418 400 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 B3GNT4Q9C0J1 378 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 AKAP7Q9P0M2 348 aaPredicted RBP12.63□□□□□ -0.39
TPM3-216ENST00000473036 SPATA7Q9P0W8 599 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 FETUBQ9UGM5 382 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 PILRAQ9UKJ1 303 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 PTPN13Q12923 2485 aa12.63□□□□□ -0.39
TPM3-216ENST00000473036 A0A0J9YY10 115 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 POLR1CO15160 346 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 SLC28A2O43868 658 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 DLGAP3O95886 979 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 SFTPCP11686 197 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 H2AFXP16104 143 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 WT1P19544 449 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 MAGP20916 626 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 BMPR2Q13873 1038 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 USP10Q14694 798 aaKnown RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 NAA30Q147X3 362 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 DEFB110Q30KQ9 67 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 DCAF12Q5T6F0 453 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 LGSNQ5TDP6 509 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 PWWP2BQ6NUJ5 590 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 CCDC81Q6ZN84 652 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 HDXQ7Z353 690 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 C19orf47Q8N9M1 422 aaKnown RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 OR1L3Q8NH93 324 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 UBLCP1Q8WVY7 318 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 MIPEPQ99797 713 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 SEMA4CQ9C0C4 833 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 AKIRIN1Q9H9L7 192 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 PARVBQ9HBI1 364 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms