RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 NETO1Q8TDF5 533 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 NRTNQ99748 197 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 MECRQ9BV79 373 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 ERVK-6Q9BXR3 956 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 CAPS2Q9BXY5 557 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 LRRN3Q9H3W5 708 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 MRPS30Q9NP92 439 aaKnown RBP10.18□□□□□ -0.78
UBE2F-220ENST00000472479 ACSS2Q9NR19 701 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 INTS7Q9NVH2 962 aaKnown RBP10.18□□□□□ -0.78
UBE2F-220ENST00000472479 OXSMQ9NWU1 459 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 ACTR10Q9NZ32 417 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 CDV3Q9UKY7 258 aaKnown RBP10.18□□□□□ -0.78
UBE2F-220ENST00000472479 ENTPD2Q9Y5L3 495 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 CACNA1EQ15878 2313 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 MUC6Q6W4X9 2439 aa10.18□□□□□ -0.78
UBE2F-220ENST00000472479 IGHV1OR21-1A0A087WYE8 117 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 LRRC14BA6NHZ5 514 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 A8MU76 341 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 G3V2L1 256 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 POLR3GO15318 223 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 BIRC5O15392 142 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 CAPN5O15484 640 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 MTHFD2P13995 350 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TSPAN8P19075 237 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 CDC16Q13042 620 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 STX3Q13277 289 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 SPIDRQ14159 915 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 GRB7Q14451 532 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 PCLAFQ15004 111 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 PDK4Q16654 411 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ATG16L1Q676U5 607 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ZCCHC23Q6ZST2 131 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 FAM92BQ6ZTR7 304 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 SPRED1Q7Z699 444 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 RASGRP3Q8IV61 690 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TBC1D19Q8N5T2 526 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 OR56A3Q8NH54 315 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 LRRC8CQ8TDW0 803 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 DENND1AQ8TEH3 1009 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TRPC4APQ8TEL6 797 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 RSC1A1Q92681 617 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 N4BP2L2Q92802 583 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 GFM1Q96RP9 751 aaKnown RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 DRC3Q9H069 523 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 EML4Q9HC35 981 aaKnown RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 SEMA4BQ9NPR2 832 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 SPHK1Q9NYA1 384 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ATXN7L1Q9ULK2 861 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 LRP4O75096 1905 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 PCDH15Q96QU1 1955 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TARM1B6A8C7 271 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 AGRPO00253 132 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 HSPA4LO95757 839 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 SBK3P0C264 359 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 GNAZP19086 355 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 BGNP21810 368 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ACP1P24666 158 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 MPSTP25325 297 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 PRDX3P30048 256 aaKnown RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 GRK3P35626 688 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 GGT5P36269 586 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 LIMK1P53667 647 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 CDH13P55290 713 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 DNAJB13P59910 316 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ABATP80404 500 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 E2F1Q01094 437 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 IRF8Q02556 426 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 PCBP2Q15366 365 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 HIST2H2ACQ16777 129 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 XKR6Q5GH73 641 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ZNF678Q5SXM1 525 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 PHF19Q5T6S3 580 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 CACHD1Q5VU97 1274 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TTC19Q6DKK2 380 aaPredicted RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 HIST2H2AA3Q6FI13 130 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 LCTLQ6UWM7 567 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TMPRSS11BQ86T26 416 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ADGRF3Q8IZF5 1079 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TMEM151AQ8N4L1 468 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 LINC01555Q8NAE3 123 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 DPYSL5Q9BPU6 564 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 TMEM79Q9BSE2 394 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 KLHL25Q9H0H3 589 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 NOL11Q9H8H0 719 aaKnown RBP10.17□□□□□ -0.78
UBE2F-220ENST00000472479 MANSC1Q9H8J5 431 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 IPPKQ9H8X2 491 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 ACTR8Q9H981 624 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 IRAK4Q9NWZ3 460 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 SOHLH2Q9NX45 425 aa10.17□□□□□ -0.78
UBE2F-220ENST00000472479 WDFY4Q6ZS81 3184 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 H7BY64 318 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 KLK8O60259 260 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 RFPL3O75679 317 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 CPNE6O95741 557 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 MLYCDO95822 493 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 UGT2B7P16662 529 aa10.16□□□□□ -0.78
UBE2F-220ENST00000472479 NPPBP16860 134 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms