RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 KIAA1644Q3SXP7 199 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 SPOUT1Q5T280 376 aaKnown RBP3.47□□□□□ -1.85
PTCD3-209ENST00000472044 MPP7Q5T2T1 576 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 C20orf194Q5TEA3 1177 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 SHEQ5VZ18 495 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 NOTUMQ6P988 496 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 CEACAM20Q6UY09 585 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 MSANTD1Q6ZTZ1 278 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 IL17RELQ6ZVW7 336 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 RTN4RL2Q86UN3 420 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 NR2C2APQ86WQ0 139 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 FAM219AQ8IW50 185 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 MMD2Q8IY49 270 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 MARVELD2Q8N4S9 558 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 ANKRD13CQ8N6S4 541 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 ZNF383Q8NA42 475 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 OR10V1Q8NGI7 309 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 GOT1L1Q8NHS2 421 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-209ENST00000472044 GRAPLQ8TC17 118 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-209ENST00000472044 LRRC8CQ8TDW0 803 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 PIGBQ92521 554 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 NSMAFQ92636 917 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 RAD54LQ92698 747 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 PROX1Q92786 737 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 PGLYRP2Q96PD5 576 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 SLC2A11Q9BYW1 496 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 TLE6Q9H808 572 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 XAB2Q9HCS7 855 aaKnown RBP3.47□□□□□ -1.85
PTCD3-209ENST00000472044 SIX2Q9NPC8 291 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 C2orf42Q9NWW7 574 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 STUB1Q9UNE7 303 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 HEG1Q9ULI3 1381 aa3.47□□□□□ -1.85
PTCD3-209ENST00000472044 A0A0G2JLW4 131 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 PMS2P5A8MQ11 134 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 BLOC1S5-TXNDC5H3BN57 136 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 SLC30A4O14863 429 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 SNX3O60493 162 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 LUC7L3O95232 432 aaKnown RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 MOCS3O95396 460 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 NADKO95544 446 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 CLPTM1O96005 669 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 GSRP00390 522 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 FAM58BPP0C7Q3 252 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 CDH3P22223 829 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 TLX1P31314 330 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 TIA1P31483 386 aaKnown RBP eCLIP3.46□□□□□ -1.867e-6■■■□□ 17.1
PTCD3-209ENST00000472044 SCN1BQ07699 218 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 TNK1Q13470 666 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 P2RY6Q15077 328 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 UGP2Q16851 508 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 LACTB2Q53H82 288 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 SLC35D3Q5M8T2 416 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 SPATA21Q7Z572 469 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 NRARPQ7Z6K4 114 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 APLFQ8IW19 511 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 LGI2Q8N0V4 545 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 EID3Q8N140 333 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 OR10Q1Q8NGQ4 319 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 CORO2AQ92828 525 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 MR1Q95460 341 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 TMEM143Q96AN5 459 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 URM1Q9BTM9 101 aaKnown RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 MLPHQ9BV36 600 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 GTPBP2Q9BX10 602 aaKnown RBP3.46□□□□□ -1.86
PTCD3-209ENST00000472044 PITPNM3Q9BZ71 974 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 PRRG4Q9BZD6 226 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 OR2B2Q9GZK3 357 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 ZMYND12Q9H0C1 365 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 LMAN1LQ9HAT1 526 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 RIPK3Q9Y572 518 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 POMT1Q9Y6A1 747 aa3.46□□□□□ -1.86
PTCD3-209ENST00000472044 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 FAM170AA1A519 330 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 C2CD4DB7Z1M9 353 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 H0Y626 953 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 RPS6KA5O75582 802 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 APOHP02749 345 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 VIMP08670 466 aaKnown RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 SPP1P10451 314 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 MYL6BP14649 208 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 CSTF2P33240 577 aaKnown RBP eCLIP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 TCF7P36402 384 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 CRKLP46109 303 aaKnown RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 CDX1P47902 265 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 MTCP1P56278 107 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 TUBB4BP68371 445 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 ZRANB3Q5FWF4 1079 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 XKR3Q5GH77 459 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 C9orf50Q5SZB4 431 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 SUSD4Q5VX71 490 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 OR4A47Q6IF82 309 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 PIGZQ86VD9 579 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 CDK20Q8IZL9 346 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 NOA1Q8NC60 698 aaKnown RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 HEXDCQ8WVB3 486 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 KCNE4Q8WWG9 221 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 HPSE2Q8WWQ2 592 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms