RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 RNASEH2BQ5TBB1 312 aaKnown RBP3.04□□□□□ -1.92
RBM39-228ENST00000471635 C11orf63Q6NUN7 778 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 ARHGAP22Q7Z5H3 698 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 TMPRSS11BQ86T26 416 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 ABHD12Q8N2K0 398 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 ATXN7L3BQ96GX2 97 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 FAM20AQ96MK3 541 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 MS4A10Q96PG2 267 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 ZNF577Q9BSK1 485 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 KIFC3Q9BVG8 833 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 TDRD1Q9BXT4 1180 aaKnown RBP3.04□□□□□ -1.92
RBM39-228ENST00000471635 MAK16Q9BXY0 300 aaKnown RBP3.04□□□□□ -1.92
RBM39-228ENST00000471635 B3GAT2Q9NPZ5 323 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 SUCLA2Q9P2R7 463 aaPredicted RBP3.04□□□□□ -1.92
RBM39-228ENST00000471635 ZNF510Q9Y2H8 683 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 TMED3Q9Y3Q3 217 aa3.04□□□□□ -1.92
RBM39-228ENST00000471635 CCDC189A1A4V9 331 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 TMEM221A6NGB7 291 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 KLLNB2CW77 178 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 FPGTO14772 594 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 OXTRP30559 389 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 PSMB10P40306 273 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 HSP90AB4PQ58FF6 505 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 SYT14P1Q58G82 188 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 SEL1L3Q68CR1 1132 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 TMEM211Q6ICI0 200 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 CCDC70Q6NSX1 233 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 NOTUMQ6P988 496 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 GDPGP1Q6ZNW5 385 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 ADGRA1Q86SQ6 560 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 KBTBD6Q86V97 674 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 THOC1Q96FV9 657 aaKnown RBP3.03□□□□□ -1.92
RBM39-228ENST00000471635 SPAG5Q96R06 1193 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 MMP27Q9H306 513 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 OSGEPL1Q9H4B0 414 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 PSD3Q9NYI0 1048 aa3.03□□□□□ -1.92
RBM39-228ENST00000471635 LOC105371242A0A075B767 164 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 A8MXK9 166 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 SNURFLB1AK76 121 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 PRKAR1AP10644 381 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 HAPLN1P10915 354 aaPredicted RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 RPL35AP18077 110 aaKnown RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 TRIM21P19474 475 aaKnown RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 DNASE1P24855 282 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 CAPGP40121 348 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 NRIP1P48552 1158 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 MAT1AQ00266 395 aaKnown RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 CD300CQ08708 224 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 CDH18Q13634 790 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 C15orf32Q32M92 178 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 UGT3A2Q3SY77 523 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 KRT79Q5XKE5 535 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 MMD2Q8IY49 270 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 SLC37A3Q8NCC5 494 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 EXD1Q8NHP7 514 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 PIGBQ92521 554 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 SYN2Q92777 582 aaPredicted RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 SPDL1Q96EA4 605 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 CNRIP1Q96F85 164 aaPredicted RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 NYXQ9GZU5 481 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 OPA3Q9H6K4 179 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 TRPV4Q9HBA0 871 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 DPP3Q9NY33 737 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 ZNF215Q9UL58 517 aaPredicted RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 PTRH2Q9Y3E5 179 aaKnown RBP3.02□□□□□ -1.93
RBM39-228ENST00000471635 R4GN57 208 aa3.02□□□□□ -1.93
RBM39-228ENST00000471635 TDRD6O60522 2096 aaKnown RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 A0A1W2PQ09 198 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 TFECO14948 347 aaPredicted RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 POP4O95707 220 aaKnown RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 HOXD4P09016 255 aaPredicted RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 DUX4L4P0CJ87 422 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 FOLR2P14207 255 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 TNFAIP3P21580 790 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 IL4RP24394 825 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 PDHA2P29803 388 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 GCH1P30793 250 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 MATR3P43243 847 aaKnown RBP eCLIP3.01□□□□□ -1.93
RBM39-228ENST00000471635 FAM180BQ6P0A1 224 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 SLC25A42Q86VD7 318 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 C17orf53Q8N3J3 647 aaPredicted RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 THAP8Q8NA92 274 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 MCUQ8NE86 351 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 PTPMT1Q8WUK0 201 aaPredicted RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 LPGAT1Q92604 370 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 TOMM40LQ969M1 308 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 SFXN2Q96NB2 322 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 LPAR4Q99677 370 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 CCDC3Q9BQI4 270 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 SYNCQ9H7C4 482 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 CHST11Q9NPF2 352 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 EQTNQ9NQ60 294 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 CTSZQ9UBR2 303 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 PADI2Q9Y2J8 665 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 WBP11Q9Y2W2 641 aaKnown RBP3.01□□□□□ -1.93
RBM39-228ENST00000471635 WIPI2Q9Y4P8 454 aa3.01□□□□□ -1.93
RBM39-228ENST00000471635 LOC102723996A0A087X1L8 192 aa3□□□□□ -1.93
RBM39-228ENST00000471635 SHISA9B4DS77 424 aa3□□□□□ -1.93
RBM39-228ENST00000471635 H0YAE9 185 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms