RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 E2F3O00716 465 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 DSCR3O14972 297 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 KCNN4O15554 427 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 USP1O94782 785 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 ONECUT2O95948 504 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 GAS8O95995 478 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 PTMAP06454 111 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 UQCRHP07919 91 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 STSP08842 583 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 RBP3P10745 1247 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 FDXRP22570 491 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 GRNP28799 593 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 PKLRP30613 574 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 PPARGP37231 505 aaPredicted RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 EIF3EP60228 445 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 AP2B1P63010 937 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 SNRPNP63162 240 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 OTUD4Q01804 1114 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 MFAP5Q13361 173 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 NAA25Q14CX7 972 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 HIF1AQ16665 826 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 FAM214AQ32MH5 1076 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 P3H1Q32P28 736 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 RPUSD3Q6P087 351 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 DARS2Q6PI48 645 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 ISLR2Q6UXK2 745 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 ARHGEF18Q6ZSZ5 1173 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 NLRP9Q7RTR0 991 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 MCATQ8IVS2 390 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 CLDN19Q8N6F1 224 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 ACTL9Q8TC94 416 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 STYXQ8WUJ0 223 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 LMF1Q96S06 567 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 SLC30A3Q99726 388 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 SLX1AQ9BQ83 275 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 GORASP1Q9BQQ3 440 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 RAB11FIP5Q9BXF6 653 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 HEMGNQ9BXL5 484 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 LRRC40Q9H9A6 602 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 CUTCQ9NTM9 273 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 NLE1Q9NVX2 485 aaPredicted RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 SPHK1Q9NYA1 384 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 COPG2Q9UBF2 871 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 DMGDHQ9UI17 866 aaKnown RBP8.75□□□□□ -1.01
CPSF4-211ENST00000471455 MRFAP1Q9Y605 127 aa8.75□□□□□ -1.01
CPSF4-211ENST00000471455 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ZGRF1Q86YA3 2104 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 LRBAP50851 2863 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 GOLGA6L9A6NEM1 432 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CCL22O00626 93 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 SOCS6O14544 535 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MAP2K7O14733 419 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 PJA2O43164 708 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 PSMD3O43242 534 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ZG16O60844 167 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CNOT3O75175 753 aaKnown RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 TJP3O95049 919 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 HPP00738 406 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MYBL2P10244 700 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 EPXP11678 715 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ACPPP15309 386 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MAGP20916 626 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MSNP26038 577 aaKnown RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ACADLP28330 430 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 PTPN7P35236 360 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 PTGER4P35408 488 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ARG2P78540 354 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 OCA2Q04671 838 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ART3Q13508 389 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 TMED2Q15363 201 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 NKG7Q16617 165 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ZNF468Q5VIY5 522 aaPredicted RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 TTC23LQ6PF05 361 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 FJX1Q86VR8 437 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 VSTM4Q8IW00 320 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 DCUN1D3Q8IWE4 304 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 FLVCR1-AS1Q8TAF5 88 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 GSDMBQ8TAX9 411 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CCDC110Q8TBZ0 833 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 EDARADDQ8WWZ3 215 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CDKN2AIPNLQ96HQ2 116 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MRFAP1L1Q96HT8 127 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 THOC3Q96J01 351 aaKnown RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MAGEB10Q96LZ2 347 aaPredicted RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CHP1Q99653 195 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CRB3Q9BUF7 120 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 OSBPL8Q9BZF1 889 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 ZBTB20Q9HC78 741 aaPredicted RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CHST11Q9NPF2 352 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 KLF2Q9Y5W3 355 aaPredicted RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 HS3ST3B1Q9Y662 390 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 MDC1Q14676 2089 aaKnown RBP8.74□□□□□ -1.01
CPSF4-211ENST00000471455 CELSR2Q9HCU4 2923 aa8.74□□□□□ -1.01
CPSF4-211ENST00000471455 TRAV17A0A0B4J275 112 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 SLC5A10A0PJK1 596 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 PCDH17O14917 1159 aa8.73□□□□□ -1.01
CPSF4-211ENST00000471455 PRPF4O43172 522 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPSF4-211ENST00000471455 HCRTR1O43613 425 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 366.5 ms