RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 NRTNQ99748 197 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 TMEM79Q9BSE2 394 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 HAUS8Q9BT25 410 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 C1QTNF3Q9BXJ4 246 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 CD244Q9BZW8 370 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 SPHK1Q9NYA1 384 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 WWOXQ9NZC7 414 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 CPSF2Q9P2I0 782 aaKnown RBP14.67□□□□□ -0.06
NPHP4-205ENST00000466897 SPAARA0A1B0GVQ0 90 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 GSAPA4D1B5 854 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 NCF1BA6NI72 391 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 A8MT66 165 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 NCF1CA8MVU1 366 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 G3V2L1 256 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 TAPBPO15533 448 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 SPAG7O75391 227 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 STK16O75716 305 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 NCF1P14598 390 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 UGT2B7P16662 529 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 PRDX3P30048 256 aaKnown RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 RPA3P35244 121 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 NAA20P61599 178 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 ABATP80404 500 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 SIM1P81133 766 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 INSM1Q01101 510 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 PRDX1Q06830 199 aaKnown RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 ZFP36L1Q07352 338 aaKnown RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 NAE1Q13564 534 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 TRA2AQ13595 282 aaKnown RBP eCLIP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 PFKFB4Q16877 469 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 AMZ1Q400G9 498 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 PRAMEF13Q5VWM6 474 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 RBM44Q6ZP01 1051 aaKnown RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 SLCO6A1Q86UG4 719 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 KMT5CQ86Y97 462 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 PPFIBP2Q8ND30 876 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 GRAMD1AQ96CP6 724 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 NUDT22Q9BRQ3 303 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 CHRNA10Q9GZZ6 450 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 ATG10Q9H0Y0 220 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 MED4Q9NPJ6 270 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 C1GALT1Q9NS00 363 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 INTS7Q9NVH2 962 aaKnown RBP14.66□□□□□ -0.06
NPHP4-205ENST00000466897 GPRC5BQ9NZH0 403 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 ANKMY1Q9P2S6 941 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 COPG2Q9UBF2 871 aa14.66□□□□□ -0.06
NPHP4-205ENST00000466897 A0A0J9YY10 115 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 ISM1B1AKI9 464 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 TMX2-CTNND1H3BSU7 103 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 DLX3O60479 287 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 DHRS4L1P0CG22 281 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 THRAP10827 490 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 MYL2P10916 166 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 CPA3P15088 417 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 HRH2P25021 359 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 CCKBRP32239 447 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 PIK3CGP48736 1102 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 PRKAA2P54646 552 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 GFERP55789 205 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 DNAJB13P59910 316 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 PCDH1Q08174 1060 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 ICE2Q659A1 982 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 IRGCQ6NXR0 463 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 SUSD1Q6UWL2 747 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 ZNF574Q6ZN55 896 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-205ENST00000466897 USP53Q70EK8 1073 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 SLITRK4Q8IW52 837 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 PTGR2Q8N8N7 351 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-205ENST00000466897 OR2L3Q8NG85 312 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 L3HYPDHQ96EM0 354 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 MED8Q96G25 268 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 TMEM74Q96NL1 305 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 FAM111AQ96PZ2 611 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 CAPS2Q9BXY5 557 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 SEMA6CQ9H3T2 930 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 SLC17A7Q9P2U7 560 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 ATXN7L1Q9ULK2 861 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-205ENST00000466897 SPEGQ15772 3267 aa14.65□□□□□ -0.06
NPHP4-205ENST00000466897 MDC1Q14676 2089 aaKnown RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 IGHV5-10-1A0A0J9YXX1 117 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 TMEM120BA0PK00 339 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 K7EPI3 171 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 E2F3O00716 465 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 GIPC1O14908 333 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 WDR47O94967 919 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 RPS17P08708 135 aaKnown RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 HOXB3P14651 431 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 NPPBP16860 134 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 CMPK1P30085 196 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 HSPA7P48741 367 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 PDX1P52945 283 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 PPP1CAP62136 330 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 HERVK_113P63132 956 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 GPS2Q13227 327 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 PCLAFQ15004 111 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 TMPRSS9Q7Z410 1059 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ARHGAP22Q7Z5H3 698 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 RAB44Q7Z6P3 723 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 TAX1BP1Q86VP1 789 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms