RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TMEM168Q9H0V1 697 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 GSTO2Q9H4Y5 243 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 DMTF1Q9Y222 760 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 TMEM233B4DJY2 109 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 EIF3FO00303 357 aaPredicted RBP18.08■□□□□ 0.48
CAPN3-209ENST00000466222 TDGF1P13385 188 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 HTR1BP28222 390 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 DPP6P42658 865 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 MS4A2Q01362 244 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 HID1Q8IV36 788 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 RASGRP3Q8IV61 690 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 CADM4Q8NFZ8 388 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 DUS3LQ96G46 650 aaKnown RBP18.08■□□□□ 0.48
CAPN3-209ENST00000466222 SPACA7Q96KW9 195 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 NPAS2Q99743 824 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 SLC25A23Q9BV35 468 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 ZDHHC5Q9C0B5 715 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 PARVBQ9HBI1 364 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 ARL15Q9NXU5 204 aa18.08■□□□□ 0.48
CAPN3-209ENST00000466222 GPR89AB7ZAQ6 455 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 PSMD12O00232 456 aaPredicted RBP18.07■□□□□ 0.48
CAPN3-209ENST00000466222 DNAJA2O60884 412 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 PSIP1O75475 530 aaKnown RBP18.07■□□□□ 0.48
CAPN3-209ENST00000466222 C8BP07358 591 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 GPR89BP0CG08 455 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 CD1EP15812 388 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 CD27P26842 260 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 ACADLP28330 430 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 GSTT1P30711 240 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 RABIFP47224 123 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 HSPA7P48741 367 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 ACADVLP49748 655 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 SRP54P61011 504 aaKnown RBP18.07■□□□□ 0.48
CAPN3-209ENST00000466222 YPEL5P62699 121 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 CSTF1Q05048 431 aaKnown RBP18.07■□□□□ 0.48
CAPN3-209ENST00000466222 FASTKQ14296 549 aaKnown RBP18.07■□□□□ 0.48
CAPN3-209ENST00000466222 RBBP5Q15291 538 aaKnown RBP18.07■□□□□ 0.48
CAPN3-209ENST00000466222 NEK10Q6ZWH5 1172 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 C1orf210Q8IVY1 113 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 RHBDF1Q96CC6 855 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 MARK4Q96L34 752 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 TMEM79Q9BSE2 394 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 KLQ9UEF7 1012 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 PCDHGA7Q9Y5G6 932 aa18.07■□□□□ 0.48
CAPN3-209ENST00000466222 LAMTOR5O43504 91 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 EML2O95834 649 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 C8GP07360 202 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 GSTM1P09488 218 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 CLCNKAP51800 687 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 GSTM4Q03013 218 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 LRP8Q14114 963 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 TRIM25Q14258 630 aaKnown RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 TLR1Q15399 786 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 DUS1LQ6P1R4 473 aaKnown RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 GK5Q6ZS86 529 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PYCR2Q96C36 320 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 SEMA4BQ9NPR2 832 aaPredicted RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PRDM8Q9NQV8 689 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PRMT8Q9NR22 394 aaPredicted RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 NUDT4Q9NZJ9 180 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PTBP2Q9UKA9 531 aaKnown RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PACSIN3Q9UKS6 424 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PRAMEF33A0A0G2JMD5 474 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 GPR37L1O60883 481 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 RASGRP1O95267 797 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 TNFAIP8O95379 198 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 C1orf105O95561 183 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 SNRPB2P08579 225 aaKnown RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 CTBSQ01459 385 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 EIF2B5Q13144 721 aaKnown RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 FZD2Q14332 565 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 C11orf91Q3C1V1 193 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PRAMEF14Q5SWL7 426 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 REP15Q6BDI9 236 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 SPATA24Q86W54 205 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 DCBLD1Q8N8Z6 715 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 PDPRQ8NCN5 879 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 OR5AR1Q8NGP9 310 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 TRPC4APQ8TEL6 797 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 OR2M4Q96R27 311 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 IER2Q9BTL4 223 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 DPEP2Q9H4A9 486 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 RMI1Q9H9A7 625 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 COPS7BQ9H9Q2 264 aaPredicted RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 RDH14Q9HBH5 336 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 ADA2Q9NZK5 511 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 AP4B1Q9Y6B7 739 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 DNMT3AQ9Y6K1 912 aaPredicted RBP18.06■□□□□ 0.48
CAPN3-209ENST00000466222 SPEGQ15772 3267 aa18.06■□□□□ 0.48
CAPN3-209ENST00000466222 ZDBF2Q9HCK1 2354 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 SPTY2D1-AS1A0A0U1RR47 76 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 EME2A4GXA9 379 aaPredicted RBP18.05■□□□□ 0.48
CAPN3-209ENST00000466222 PRR19A6NJB7 356 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 BBIP1A8MTZ0 92 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 E2F3O00716 465 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 CELA2BP08218 269 aaPredicted RBP18.05■□□□□ 0.48
CAPN3-209ENST00000466222 KELP23276 732 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 PRDX3P30048 256 aaKnown RBP18.05■□□□□ 0.48
CAPN3-209ENST00000466222 PRKG2Q13237 762 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 CLCA4Q14CN2 919 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms