RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CTNNAL1Q9UBT7 734 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 RARRES3Q9UL19 164 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 FER1L5A0AVI2 2057 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 PABPN1LA6NDY0 278 aaKnown RBP11.92□□□□□ -0.5
CHPF2-202ENST00000465601 SRRM3A6NNA2 597 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ZNF839A8K0R7 811 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 TMEM150CB9EJG8 249 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 HCRTR1O43613 425 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 GUCA1CO95843 209 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 INHBAP08476 426 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ABHD2P08910 425 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 FGF5P12034 268 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ZNF28P17035 718 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 GRIA3P42263 894 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 MSH2P43246 934 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 VSNL1P62760 191 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 TUBB4BP68371 445 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 CSHL1Q14406 222 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 TGIF1Q15583 401 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 TSNQ15631 228 aaKnown RBP11.92□□□□□ -0.5
CHPF2-202ENST00000465601 FCRL6Q6DN72 434 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 SBSNQ6UWP8 590 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 CDHR3Q6ZTQ4 885 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 PPP1R3BQ86XI6 285 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 LRRC56Q8IYG6 542 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-202ENST00000465601 OR2L3Q8NG85 312 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 KCNE4Q8WWG9 221 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ANKRD7Q92527 254 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ALKBH8Q96BT7 664 aaKnown RBP11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ZNF501Q96CX3 271 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-202ENST00000465601 TCTN2Q96GX1 697 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 DERL2Q9GZP9 239 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ATG10Q9H0Y0 220 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 EPB41L4BQ9H329 900 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ARL15Q9NXU5 204 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 TAC3Q9UHF0 121 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 IKBKGQ9Y6K9 419 aa11.92□□□□□ -0.5
CHPF2-202ENST00000465601 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 KLK10O43240 276 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 STK17BO94768 372 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 KIAA0754O94854 1291 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 FKBP9O95302 570 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 TIAF1O95411 115 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 ENO2P09104 434 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 SLC35E2BP0CK96 405 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 CD1DP15813 335 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 CD82P27701 267 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 ITPKBP27987 946 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 CRABP2P29373 138 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 CMPK1P30085 196 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 AP1S2P56377 157 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 DLG1Q12959 904 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 CLN3Q13286 438 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 NAE1Q13564 534 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 SLC29A2Q14542 456 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 ERCC6LQ2NKX8 1250 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 DEFB110Q30KQ9 67 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 THEMIS2Q5TEJ8 643 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 PRAMEF17Q5VTA0 474 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 PWWP2BQ6NUJ5 590 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 CYB5D1Q6P9G0 228 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 AGTRAPQ6RW13 159 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 LRRC69Q6ZNQ3 347 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 BPHLQ86WA6 291 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 DNAJC22Q8N4W6 341 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 DCAKDQ8WVC6 231 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 MED8Q96G25 268 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 UBXN10Q96LJ8 280 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 ULBP3Q9BZM4 244 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 FANCEQ9HB96 536 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 SNX15Q9NRS6 342 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 INTS7Q9NVH2 962 aaKnown RBP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 NOVA2Q9UNW9 492 aaKnown RBP11.91□□□□□ -0.5
CHPF2-202ENST00000465601 MGAQ8IWI9 3026 aa11.91□□□□□ -0.5
CHPF2-202ENST00000465601 ZFYVE26Q68DK2 2539 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TEX51A0A1B0GUA7 166 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TARM1B6A8C7 271 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 STMND1H3BQB6 276 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 NTRK1P04629 796 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 C2P06681 752 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 LIPCP11150 499 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TYK2P29597 1187 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 GABRA4P48169 554 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 SERPINB9P50453 376 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 ATP6V0D1P61421 351 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TBPL1P62380 186 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 PRDX1Q06830 199 aaKnown RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 OR4D1Q15615 310 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 ZXDCQ2QGD7 858 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 ICE2Q659A1 982 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TIPARPQ7Z3E1 657 aaKnown RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 ADAMTSL2Q86TH1 951 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TBC1D1Q86TI0 1168 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms