RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PRICKLE3O43900 615 aaPredicted RBP11.45□□□□□ -0.58
APTX-213ENST00000465003 TIAF1O95411 115 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 PYGBP11216 843 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 KRT15P19012 456 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 MAGEA12P43365 314 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 FAM219BQ5XKK7 198 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 PRSS42Q7Z5A4 293 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 PLD3Q8IV08 490 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 C4orf33Q8N1A6 199 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 NAF1Q96HR8 494 aaKnown RBP11.45□□□□□ -0.58
APTX-213ENST00000465003 TSNARE1Q96NA8 513 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 GPR78Q96P69 363 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 TRAPPC9Q96Q05 1148 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 CCDC77Q9BR77 488 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 RAB33BQ9H082 229 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 SYNPO2LQ9H987 977 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 SLC6A20Q9NP91 592 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 INTS7Q9NVH2 962 aaKnown RBP11.45□□□□□ -0.58
APTX-213ENST00000465003 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 CPSF2Q9P2I0 782 aaKnown RBP11.45□□□□□ -0.58
APTX-213ENST00000465003 OARD1Q9Y530 152 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 B3GALT1Q9Y5Z6 326 aa11.45□□□□□ -0.58
APTX-213ENST00000465003 HEATR5BQ9P2D3 2071 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 IGKV1-8A0A0C4DH67 115 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 PABPN1LA6NDY0 278 aaKnown RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 LRRC14BA6NHZ5 514 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 SUPT3HB4E1H0 165 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 KDM1AO60341 852 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 SUPT3HO75486 399 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 NUDT17P0C025 328 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 NELFEP18615 380 aaKnown RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 RPA3P35244 121 aaPredicted RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 ARL4DP49703 201 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 AGTR2P50052 363 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 MEF2AQ02078 507 aaPredicted RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 C16orf46Q6P387 395 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 CDHR3Q6ZTQ4 885 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 ADAMTSL2Q86TH1 951 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 GPSM1Q86YR5 675 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 RAB42Q8N4Z0 105 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 BMPERQ8N8U9 685 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 FBXO15Q8NCQ5 510 aaPredicted RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 MYRIPQ8NFW9 859 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 OR2L3Q8NG85 312 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 WDR36Q8NI36 951 aaKnown RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 SMPDL3AQ92484 453 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 GATA6Q92908 595 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 USP7Q93009 1102 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 SCYL1Q96KG9 808 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 CCDC138Q96M89 665 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 OR4K3Q96R72 315 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 RAB11FIP5Q9BXF6 653 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 POLR1BQ9H9Y6 1135 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 SIDT1Q9NXL6 827 aaKnown RBP11.44□□□□□ -0.58
APTX-213ENST00000465003 EURLQ9NYK6 297 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 CD274Q9NZQ7 290 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 XPR1Q9UBH6 696 aa11.44□□□□□ -0.58
APTX-213ENST00000465003 A0A087X1B8 175 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 A0A0J9YY10 115 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 IQANK1A0A1B0GTG1 560 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 C9orf172C9J069 976 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 SLC16A5O15375 505 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 KLHL2O95198 593 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ZBTB11O95625 1053 aaPredicted RBP11.43□□□□□ -0.58
APTX-213ENST00000465003 OAS2P29728 719 aaKnown RBP11.43□□□□□ -0.58
APTX-213ENST00000465003 HSPA7P48741 367 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 SHC2P98077 582 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 TUBB3Q13509 450 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 KIR2DS3Q14952 304 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 PTCHD3Q3KNS1 767 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 FCRL6Q6DN72 434 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ADCK2Q7Z695 626 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ISL2Q96A47 359 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 KIAA1191Q96A73 305 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 MOCOSQ96EN8 888 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 SLC41A2Q96JW4 573 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ZIM3Q96PE6 472 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ATOH8Q96SQ7 321 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 TMEM79Q9BSE2 394 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 DPH7Q9BTV6 452 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 CCDC177Q9NQR7 707 aaPredicted RBP11.43□□□□□ -0.58
APTX-213ENST00000465003 C1GALT1Q9NS00 363 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 STARD5Q9NSY2 213 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 SDK2Q58EX2 2172 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 HGSO14964 777 aaPredicted RBP11.43□□□□□ -0.58
APTX-213ENST00000465003 TAPBPO15533 448 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 CTSVO60911 334 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ANKRD34CP0C6C1 535 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ZNF28P17035 718 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 CNTFP26441 200 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 HSD11B2P80365 405 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 ZNF844Q08AG5 666 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 TRA2AQ13595 282 aaKnown RBP eCLIP11.43□□□□□ -0.58
APTX-213ENST00000465003 FAM83EQ2M2I3 478 aa11.43□□□□□ -0.58
APTX-213ENST00000465003 BEND6Q5SZJ8 279 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms