RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SULT1E1P49888 294 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 CCR3P51677 355 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 CAPZA1P52907 286 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ATXN3P54252 364 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 NME5P56597 212 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 KCNJ10P78508 379 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 NIPAL4Q0D2K0 466 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 GRAPQ13588 217 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TRA2AQ13595 282 aaKnown RBP eCLIP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ZNF273Q14593 569 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TMEM187Q14656 261 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 DUOXA1Q1HG43 343 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ASTE1Q2TB18 679 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 KIAA1644Q3SXP7 199 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 LCN10Q6JVE6 187 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MSANTD1Q6ZTZ1 278 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ERN2Q76MJ5 926 aaKnown RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 SPATA19Q7Z5L4 167 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 NBPF5PQ86XG9 351 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TICAM1Q8IUC6 712 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 PI4KAP1Q8N8J0 262 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MRPL43Q8N983 215 aaKnown RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 XXYLT1Q8NBI6 393 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 CNNM3Q8NE01 707 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 DENND6BQ8NEG7 585 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ZNF473Q8WTR7 871 aaKnown RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 GIMAP1Q8WWP7 306 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 PRCCQ92733 491 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 PTERQ96BW5 349 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 OXNAD1Q96HP4 312 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 INTS14Q96SY0 518 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MAP7D2Q96T17 732 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MGME1Q9BQP7 344 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TRIM15Q9C019 465 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 NT5C3AQ9H0P0 336 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 WDR13Q9H1Z4 485 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ABCG8Q9H221 673 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MAGIXQ9H6Y5 334 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 RRP7BPQ9NSQ0 103 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ABCB8Q9NUT2 735 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 AATFQ9NY61 560 aaKnown RBP eCLIP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 SEPT10Q9P0V9 454 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 DLGAP2Q9P1A6 1054 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 KLHL9Q9P2J3 617 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 AMACRQ9UHK6 382 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 GPR75-ASB3A0A0A6YYF3 556 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 A0A0B4J203 849 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 A0A1W2PRG0 241 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 TCRBV21S2A2A0A5A6 115 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CLRN2A0PK11 232 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 EIF4E1BA6NMX2 242 aaKnown RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CDRT15L2A8MXV6 281 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 MCF2LO15068 1137 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 NKX2-2O95096 273 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 TRIM16O95361 564 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 ZFYP08048 801 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 IGHV4-38-2P0DP08 117 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 GHRP10912 638 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 TOP1P11387 765 aaKnown RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 RPA1P27694 616 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 PRCPP42785 496 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 GBE1Q04446 702 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 SPOCK1Q08629 439 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 RALGDSQ12967 914 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 TMED1Q13445 227 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 DPCR1Q3MIW9 517 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 RABL6Q3YEC7 729 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 JADE1Q6IE81 842 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 FIP1L1Q6UN15 594 aaKnown RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 Q75L30 129 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 GBGT1Q8N5D6 347 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 TC2NQ8N9U0 490 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CAMKVQ8NCB2 501 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 OR1J2Q8NGS2 313 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 ST7LQ8TDW4 575 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 FAM149B1Q96BN6 582 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 SENP5Q96HI0 755 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 PRMT6Q96LA8 375 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CFAP57Q96MR6 1250 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 GDAP1L1Q96MZ0 367 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 FAM111AQ96PZ2 611 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 SEMA3CQ99985 751 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 PSD2Q9BQI7 771 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 DCTN5Q9BTE1 182 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 MLPHQ9BV36 600 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 UTP14AQ9BVJ6 771 aaKnown RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CACNG6Q9BXT2 260 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 VPS37BQ9H9H4 285 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 APOBEC3GQ9HC16 384 aaKnown RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 SLC38A7Q9NVC3 462 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 ARHGEF38Q9NXL2 777 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CYP39A1Q9NYL5 469 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 ABI3Q9P2A4 366 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 EXTL2Q9UBQ6 330 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 ARMCX3Q9UH62 379 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 MRPS28Q9Y2Q9 187 aaKnown RBP3.75□□□□□ -1.81
ITGB1-208ENST00000464001 KIF3AQ9Y496 699 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 LIPGQ9Y5X9 500 aa3.75□□□□□ -1.81
ITGB1-208ENST00000464001 CLCA3PQ9Y6N3 262 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms