RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 LINC01555Q8NAE3 123 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 CDKN2AIPNLQ96HQ2 116 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ZNF285Q96NJ3 590 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 YIPF2Q9BWQ6 316 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 RNF32Q9H0A6 362 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ARNT2Q9HBZ2 717 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 GPAMQ9HCL2 828 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
SMC1A-204ENST00000463684 TARM1B6A8C7 271 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 C19orf84I3L1E1 186 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 PRAMEF2O60811 474 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 ICAM2P13598 275 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 FBLP22087 321 aaKnown RBP13.8□□□□□ -0.2
SMC1A-204ENST00000463684 KIR3DL1P43629 444 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 CSE1LP55060 971 aaKnown RBP13.8□□□□□ -0.2
SMC1A-204ENST00000463684 TLE4Q04727 773 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 C3AR1Q16581 482 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 LONRF1Q17RB8 773 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 ABHD17BQ5VST6 288 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 HIBCHQ6NVY1 386 aaPredicted RBP13.8□□□□□ -0.2
SMC1A-204ENST00000463684 MYO7BQ6PIF6 2116 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 ARHGEF18Q6ZSZ5 1173 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 LAPTM4BQ86VI4 370 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 TAX1BP1Q86VP1 789 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 DTWD1Q8N5C7 304 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 OR8K1Q8NGG5 319 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 OR2L8Q8NGY9 312 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 CFAP61Q8NHU2 1237 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 STYXQ8WUJ0 223 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 MAGED4Q96JG8 741 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 SPOCK3Q9BQ16 436 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 HEMGNQ9BXL5 484 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 RIC8BQ9NVN3 520 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 STMN3Q9NZ72 180 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 SLC39A10Q9ULF5 831 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 FAM169AQ9Y6X4 670 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 SVILO95425 2214 aa13.8□□□□□ -0.2
SMC1A-204ENST00000463684 ANKRD12Q6UB98 2062 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 DOCK10Q96BY6 2186 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 IGHV1-45A0A0A0MS14 117 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 OR5H15A6NDH6 313 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 APOC4-APOC2K7ER74 178 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 DIAPH2O60879 1101 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 FKBP9O95302 570 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 MLYCDO95822 493 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 APOC2P02655 101 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 EIF2S1P05198 315 aaKnown RBP13.79□□□□□ -0.2
SMC1A-204ENST00000463684 HEXBP07686 556 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 EEF1A2Q05639 463 aaKnown RBP13.79□□□□□ -0.2
SMC1A-204ENST00000463684 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 TTC23LQ6PF05 361 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 PACS1Q6VY07 963 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 BBS12Q6ZW61 710 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 CDKL3Q8IVW4 592 aaPredicted RBP13.79□□□□□ -0.2
SMC1A-204ENST00000463684 KATNAL2Q8IYT4 538 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 LMNTD1Q8N9Z9 388 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 ADAMTS18Q8TE60 1221 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 POM121Q96HA1 1249 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 TTC1Q99614 292 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 MCCC2Q9HCC0 563 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 CIDEBQ9UHD4 219 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 TEKT2Q9UIF3 430 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 TINAGQ9UJW2 476 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 CDC14AQ9UNH5 594 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMC1A-204ENST00000463684 ALG6Q9Y672 507 aa13.79□□□□□ -0.2
SMC1A-204ENST00000463684 IGLV3-12A0A075B6K2 115 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 IDSB3KWA1 339 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMC1A-204ENST00000463684 CTSVO60911 334 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 ERVK-10P10266 1014 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 ITGAMP11215 1152 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 CD1EP15812 388 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 TPH1P17752 444 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
SMC1A-204ENST00000463684 CTNNA2P26232 953 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 HSPA14Q0VDF9 509 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
SMC1A-204ENST00000463684 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 DCUN1D3Q8IWE4 304 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 CCDC42Q96M95 316 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 MENTQ9BUN1 341 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 TSSK1BQ9BXA7 367 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 RAB11FIP5Q9BXF6 653 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 TRPC4Q9UBN4 977 aa13.78□□□□□ -0.2
SMC1A-204ENST00000463684 A0A0J9YVX5 310 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 A0A1W2PQ72 361 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 FAM227AF5H4B4 570 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 FANCGO15287 622 aa13.77□□□□□ -0.21
SMC1A-204ENST00000463684 MED26O95402 600 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms