RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 GKP32189 559 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 CTSL3PQ5NE16 218 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF621Q6ZSS3 439 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 NKAPQ8N5F7 415 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 REXO5Q96IC2 774 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 CHCHD6Q9BRQ6 235 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 DSN1Q9H410 356 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 ABT1Q9ULW3 272 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 LOC730098B7Z3J9 87 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 OR7A17O14581 309 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 TFECO14948 347 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 RGS5O15539 181 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 KLKB1P03952 638 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 TGM1P22735 817 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 TACR1P25103 407 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 AZGP1P25311 298 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 AKAP14Q86UN6 197 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 P3H2Q8IVL5 708 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 RGL4Q8IZJ4 473 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 RHBDF1Q96CC6 855 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 GPR63Q9BZJ6 419 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 MAGEH1Q9H213 219 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 MUC13Q9H3R2 512 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 PALMDQ9NP74 551 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 SPATA7Q9P0W8 599 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 TMEFF2Q9UIK5 374 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 FFAR2O15552 330 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ACSL4O60488 711 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 TSPAN12O95859 305 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CD160O95971 181 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 OGNP20774 298 aaKnown RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CD40LGP29965 261 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 DAPP51397 102 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 SGSHP51688 502 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 TRAF3Q13114 568 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF648Q5T619 568 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF691Q5VV52 312 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 STEAP3Q658P3 488 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 PDE12Q6L8Q7 609 aaKnown RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CD99L2Q8TCZ2 262 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 OVCA2Q8WZ82 227 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 Q96MT0 163 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 KCNS3Q9BQ31 491 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 GPRC5BQ9NZH0 403 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 DLGAP4Q9Y2H0 992 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 UNC80Q8N2C7 3258 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 NT5C1B-RDH14C9J2C7 533 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 RGS10O43665 173 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 PRR35P0CG20 571 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 MSH3P20585 1137 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CLK3P49761 638 aaKnown RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CREMQ03060 361 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 HIST2H2ACQ16777 129 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 UAP1L1Q3KQV9 507 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ATXN7L2Q5T6C5 722 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 DESI1Q6ICB0 168 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 PRSS55Q6UWB4 352 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 NPAS4Q8IUM7 802 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ARMC8Q8IUR7 673 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 DENND1CQ8IV53 801 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 MFSD4AQ8N468 514 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 OR6Q1Q8NGQ2 317 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 KRT84Q9NSB2 600 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 NLE1Q9NVX2 485 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-208ENST00000463007 TPRKBQ9Y3C4 175 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 PCDHB7Q9Y5E2 793 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 CDH23Q9H251 3354 aa12.11□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 GFRA2O00451 464 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 ASNA1O43681 348 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 AIREO43918 545 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 GJB5O95377 273 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 OPN1SWP03999 348 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 INHAP05111 366 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 CD6P30203 668 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 LIPAP38571 399 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 CRISP3P54108 245 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 PHC1P78364 1004 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 ELAVL2Q12926 359 aaKnown RBP12.1□□□□□ -0.47
HDAC4-208ENST00000463007 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-208ENST00000463007 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 CACHD1Q5VU97 1274 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 OR4F3Q6IEY1 312 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 CACTIN-AS1Q8N1I8 211 aa12.1□□□□□ -0.47
HDAC4-208ENST00000463007 GOLM1Q8NBJ4 401 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms