RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NDUFS1P28331 727 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 OTX2P32243 289 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CBSP35520 551 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 SLC1A2P43004 574 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 GCGRP47871 477 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CD151P48509 253 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 TTPAP49638 278 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 RRADP55042 308 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 MRPS25P82663 173 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 SARNPP82979 210 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 DR1Q01658 176 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 C2orf54Q08AI8 447 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 PRKAA1Q13131 559 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 BOP1Q14137 746 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 DHX34Q14147 1143 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 GBX1Q14549 363 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 BRD3Q15059 726 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZIC1Q15915 447 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 DEFB110Q30KQ9 67 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 HIBCHQ6NVY1 386 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 IGFL3Q6UXB1 125 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CENPUQ71F23 418 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF572Q7Z3I7 529 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 TRIM73Q86UV7 250 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 RAB43Q86YS6 212 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CILP2Q8IUL8 1156 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 IGDCC3Q8IVU1 814 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 IQCKQ8N0W5 287 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 KRT222Q8N1A0 295 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 LCN9Q8WX39 176 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 PWWP2AQ96N64 755 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 RUNDC3BQ96NL0 473 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 GBP5Q96PP8 586 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 KRT12Q99456 494 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 DPH2Q9BQC3 489 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 HGH1Q9BTY7 390 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 DHRS4Q9BTZ2 278 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CARD6Q9BX69 1037 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 SRMSQ9H3Y6 488 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 TFB2MQ9H5Q4 396 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 XKR8Q9H6D3 395 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF552Q9H707 407 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZBTB20Q9HC78 741 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 FAM60AQ9NP50 221 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 C5AR2Q9P296 337 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 ICKQ9UPZ9 632 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 HEBP2Q9Y5Z4 205 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 COLEC10Q9Y6Z7 277 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 NCOA6Q14686 2063 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 C9J4A7 227 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 E7EQ34 232 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 E2F3O00716 465 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 RAD51CO43502 376 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 NIPSNAP2O75323 286 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 UMODP07911 640 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 TPBGLP0DKB5 382 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 ITGAXP20702 1163 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CASQ1P31415 396 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 PAFAH1B1P43034 410 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 RPL21P46778 160 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 ITGA8P53708 1063 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CSE1LP55060 971 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 ADARP55265 1226 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 EIF3BP55884 814 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CRYMQ14894 314 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 MYBPC3Q14896 1274 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 MORF4L2Q15014 288 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 DCAF10Q5QP82 559 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 C1QL3Q5VWW1 255 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF470Q6ECI4 717 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 RHBDD2Q6NTF9 364 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 MRPL14Q6P1L8 145 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CASC4Q6P4E1 433 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 SPESP1Q6UW49 350 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 Q6ZS92 163 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 PPP1R32Q7Z5V6 425 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CUZD1Q86UP6 607 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 DENND6AQ8IWF6 608 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 SLC22A15Q8IZD6 547 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 GALNT16Q8N428 558 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CISD2Q8N5K1 135 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 C19orf47Q8N9M1 422 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 PHC3Q8NDX5 983 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 SPATA4Q8NEY3 305 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 OR5AR1Q8NGP9 310 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 TFGQ92734 400 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 MENTQ9BUN1 341 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 ACTR10Q9NZ32 417 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 SAMD15Q9P1V8 674 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 MAP10Q9P2G4 905 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 GALPQ9UBC7 116 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 GNPTGQ9UJJ9 305 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 G3BP2Q9UN86 482 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 SLC5A6Q9Y289 635 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 B3GNT3Q9Y2A9 372 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 PADI2Q9Y2J8 665 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 MED16Q9Y2X0 877 aa7.62□□□□□ -1.19
CDC42BPA-210ENST00000462553 CSAG2Q9Y5P2 127 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms