RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ITGAXP20702 1163 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 FOLR3P41439 243 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 MLLT10P55197 1068 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 RELAQ04206 551 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 GRM7Q14831 915 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 ARHGAP19Q14CB8 494 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 TRIP13Q15645 432 aaPredicted RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 FAM214AQ32MH5 1076 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 ANKRD20A4Q4UJ75 823 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 ANKRD22Q5VYY1 191 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 IGFL3Q6UXB1 125 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 NEK10Q6ZWH5 1172 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 OVCH1Q7RTY7 1134 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 PPP1R32Q7Z5V6 425 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 ATCAYQ86WG3 371 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 CILP2Q8IUL8 1156 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 LMNTD2Q8IXW0 634 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 C2orf73Q8N5S3 287 aaPredicted RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 FBXO15Q8NCQ5 510 aaPredicted RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 OR2L3Q8NG85 312 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 OR9A1PQ8NGU1 263 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 FER1L6-AS2Q96M78 137 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 NAP1L3Q99457 506 aaPredicted RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 NUDT9Q9BW91 350 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 WDR54Q9H977 334 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 GPR83Q9NYM4 423 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 GALPQ9UBC7 116 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 NDOR1Q9UHB4 597 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 CIDEBQ9UHD4 219 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 G3BP2Q9UN86 482 aaKnown RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 PLAAQ9Y263 795 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 CRYL1Q9Y2S2 319 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 PTRH2Q9Y3E5 179 aaKnown RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 PTPN13Q12923 2485 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 LRRK2Q5S007 2527 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 OR2A25A4D2G3 310 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 TTLL8A6PVC2 850 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 MYO1CO00159 1063 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 PEX12O00623 359 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 CES2O00748 559 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF185O15231 689 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 CTSVO60911 334 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 PSIP1O75475 530 aaKnown RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 CHRM3P20309 590 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 ALAS2P22557 587 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 OTX2P32243 289 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 HSD17B2P37059 387 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 BDKRB1P46663 353 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 VPS41P49754 854 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 CLCN7P51798 805 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 SRSF1Q07955 248 aaKnown RBP eCLIP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 DHX34Q14147 1143 aaKnown RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 MYBPC3Q14896 1274 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 NAA25Q14CX7 972 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 NKG7Q16617 165 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 NADK2Q4G0N4 442 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 ACSBG2Q5FVE4 666 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 DCAF10Q5QP82 559 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 WASHC2DQ5SRD0 308 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 JMJD6Q6NYC1 403 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 FBXO42Q6P3S6 717 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 CCDC137Q6PK04 289 aaKnown RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 TTLL10Q6ZVT0 673 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 RNF44Q7L0R7 432 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 REXO1L1PQ8IX06 675 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 OTUD6BQ8N6M0 293 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 RBMXL3Q8N7X1 1067 aaKnown RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 NAT8LQ8N9F0 302 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 GALNT11Q8NCW6 608 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 ACTRT1Q8TDG2 376 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 SKA2Q8WVK7 121 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-207ENST00000461798 MS4A14Q96JA4 679 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 SIGLEC10Q96LC7 697 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 SERPINB12Q96P63 405 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 SELENOSQ9BQE4 189 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 CUTCQ9NTM9 273 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 P4HTMQ9NXG6 502 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 SAMD15Q9P1V8 674 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 MED16Q9Y2X0 877 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 COMMD10Q9Y6G5 202 aa8.77□□□□□ -1.01
BRCA1-207ENST00000461798 A6NL46 340 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 VSTM2BA6NLU5 285 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ARHGEF33A8MVX0 844 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 GFYI3L273 518 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 PGRMC1O00264 195 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 PHF2O75151 1096 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 USP1O94782 785 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 MPC1LP0DKB6 136 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ENO3P13929 434 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 MMP11P24347 488 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 FNTAP49354 379 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 THOC5Q13769 683 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 FASTKQ14296 549 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 SLC9A5Q14940 896 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 KCTD19Q17RG1 926 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 KLHL38Q2WGJ6 581 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 TTLL9Q3SXZ7 439 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms