RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 TFEBP19484 476 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 RBMS1P29558 406 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 MLLT3P42568 568 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 ARL4DP49703 201 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 HNMTP50135 292 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 PCBP4P57723 403 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 HSD11B2P80365 405 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 DLG1Q12959 904 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 FASTKQ14296 549 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 NAA25Q14CX7 972 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 SF1Q15637 639 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 TSNAXIP1Q2TAA8 658 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 AGTRAPQ6RW13 159 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 ISCA2Q86U28 154 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 LCA5Q86VQ0 697 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 GPSM1Q86YR5 675 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 LRRC56Q8IYG6 542 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 C2orf73Q8N5S3 287 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 LMNTD1Q8N9Z9 388 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 SNIP1Q8TAD8 396 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 KCTD4Q8WVF5 259 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 NXNL1Q96CM4 212 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 NAF1Q96HR8 494 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 TSNARE1Q96NA8 513 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 TMEM109Q9BVC6 243 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 PCBD2Q9H0N5 130 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 INTS7Q9NVH2 962 aaKnown RBP21.67■■□□□ 1.06
C9orf3-209ENST00000460573 EURLQ9NYK6 297 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 SATB2Q9UPW6 733 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 BTRCQ9Y297 605 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 ZZEF1O43149 2961 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 A0A1W2PPV9 198 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 B4E171 279 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 JMJD7P0C870 316 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 RPA3P35244 121 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-209ENST00000460573 TSPAN7P41732 249 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 SLCO1A2P46721 670 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 SEPHS1P49903 392 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 IRF9Q00978 393 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 TGFBIQ15582 683 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 TMTC4Q5T4D3 741 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 BROXQ5VW32 411 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 IGF2-ASQ6U949 168 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 TCAIMQ8N3R3 496 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 OR2A1Q8NGT9 310 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 EPS8L3Q8TE67 593 aaKnown RBP21.66■■□□□ 1.06
C9orf3-209ENST00000460573 PTERQ96BW5 349 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 ZNF578Q96N58 590 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-209ENST00000460573 TRAPPC9Q96Q05 1148 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 UNKQ9C0B0 810 aaKnown RBP21.66■■□□□ 1.06
C9orf3-209ENST00000460573 CCDC177Q9NQR7 707 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-209ENST00000460573 THSD1Q9NS62 852 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 WDR70Q9NW82 654 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 UTP6Q9NYH9 597 aaKnown RBP21.66■■□□□ 1.06
C9orf3-209ENST00000460573 RNF112Q9ULX5 631 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 PLAAQ9Y263 795 aa21.66■■□□□ 1.06
C9orf3-209ENST00000460573 SLC9B1P1A6NJY1 282 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 SYCE1LA8MT33 242 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 CCNDBP1O95273 360 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 GUCA1CO95843 209 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 MT-ND3P03897 115 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 ITPKBP27987 946 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 OR4D1Q15615 310 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 CAPN13Q6MZZ7 669 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-209ENST00000460573 MBOAT1Q6ZNC8 495 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 TAX1BP1Q86VP1 789 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 D2HGDHQ8N465 521 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 ZNF248Q8NDW4 579 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 OR2W6PQ8NHA6 318 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 MZB1Q8WU39 189 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 ZUFSPQ96AP4 578 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 EGFL8Q99944 293 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 B3GNT4Q9C0J1 378 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 CHRNA10Q9GZZ6 450 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 ALG9Q9H6U8 611 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 PDE7BQ9NP56 450 aa21.65■■□□□ 1.06
C9orf3-209ENST00000460573 TLDC2A0PJX2 215 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 SMIM23A6NLE4 172 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 EFCAB7A8K855 629 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 TARM1B6A8C7 271 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 KERAO60938 352 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 S100BP04271 92 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-209ENST00000460573 RBP1P09455 135 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 ST6GAL1P15907 406 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 KRT15P19012 456 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 CMPK1P30085 196 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 ABATP80404 500 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 PRDX1Q06830 199 aaKnown RBP21.64■■□□□ 1.05
C9orf3-209ENST00000460573 NAE1Q13564 534 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 TSTA3Q13630 321 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-209ENST00000460573 SUSD1Q6UWL2 747 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 CLEC14AQ86T13 490 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 FAM129CQ86XR2 697 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 PPFIBP2Q8ND30 876 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 OR2L3Q8NG85 312 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 OR56A3Q8NH54 315 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 TCTN2Q96GX1 697 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 PPM1MQ96MI6 270 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 GPR78Q96P69 363 aa21.64■■□□□ 1.05
C9orf3-209ENST00000460573 ATG10Q9H0Y0 220 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms