RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 STX16O14662 325 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 TAPBPO15533 448 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 CPNE6O95741 557 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 SBK3P0C264 359 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 NR1D1P20393 614 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 CDH3P22223 829 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 CMPK1P30085 196 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 GFERP55789 205 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 PPP2R2AP63151 447 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 E2F1Q01094 437 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 SPESP1Q6UW49 350 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 LRRC70Q7Z2Q7 622 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 TRIM73Q86UV7 250 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 THOC6Q86W42 341 aaKnown RBP13.65□□□□□ -0.22
LINC00887-204ENST00000456816 TMEM151AQ8N4L1 468 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 OR56A3Q8NH54 315 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 WDR48Q8TAF3 677 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 DPYSL5Q9BPU6 564 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 NUDT22Q9BRQ3 303 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 HAUS8Q9BT25 410 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 CD244Q9BZW8 370 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 APOBEC2Q9Y235 224 aaKnown RBP13.65□□□□□ -0.22
LINC00887-204ENST00000456816 SLC22A14Q9Y267 594 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 LAMA1P25391 3075 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 RIF1Q5UIP0 2472 aaKnown RBP13.65□□□□□ -0.22
LINC00887-204ENST00000456816 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 K7EPI3 171 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 MAP3K7O43318 606 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 KLK8O60259 260 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 SIX3O95343 332 aaPredicted RBP13.64□□□□□ -0.23
LINC00887-204ENST00000456816 CEACAM1P13688 526 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 MPSTP25325 297 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PEBP1P30086 187 aaKnown RBP13.64□□□□□ -0.23
LINC00887-204ENST00000456816 ALDH3A1P30838 453 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 CSF2RBP32927 897 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 GGT5P36269 586 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 SLC6A12P48065 614 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 SERPINB4P48594 390 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PIK3CGP48736 1102 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 ARL4DP49703 201 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PRKAA2P54646 552 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PPP1CAP62136 330 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 HERVK_113P63132 956 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 NFKB2Q00653 900 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 MPP2Q14168 576 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PCLAFQ15004 111 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 RBBP7Q16576 425 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PDK4Q16654 411 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 LIPMQ5VYY2 423 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 WDR74Q6RFH5 385 aaPredicted RBP13.64□□□□□ -0.23
LINC00887-204ENST00000456816 ADCK2Q7Z695 626 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 GLRX5Q86SX6 157 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 C17orf64Q86WR6 236 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 NUDCD3Q8IVD9 361 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 C10orf107Q8IVU9 208 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 TEX9Q8N6V9 391 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 DYDC1Q8WWB3 177 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 ATP6V1E2Q96A05 226 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 MECRQ9BV79 373 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 SGPP1Q9BX95 441 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 ERVK-6Q9BXR3 956 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 KLHL25Q9H0H3 589 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 MRPS30Q9NP92 439 aaKnown RBP13.64□□□□□ -0.23
LINC00887-204ENST00000456816 INTS7Q9NVH2 962 aaKnown RBP13.64□□□□□ -0.23
LINC00887-204ENST00000456816 POMT2Q9UKY4 750 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 PCDHGA1Q9Y5H4 931 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 KCNE2Q9Y6J6 123 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
LINC00887-204ENST00000456816 WDR87Q6ZQQ6 2873 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 MYO15AQ9UKN7 3530 aa13.64□□□□□ -0.23
LINC00887-204ENST00000456816 FAM186AA6NE01 2351 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 A0A0J9YY10 115 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 A0A1W2PPV9 198 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 A0A1W2PQM1 296 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 TLCD2A6NGC4 264 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 A8MU76 341 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 D6RAR5 112 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 H3BQF6 201 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 CLGNO14967 610 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 CASC3O15234 703 aaKnown RBP13.63□□□□□ -0.23
LINC00887-204ENST00000456816 TRIM13O60858 407 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 SUPT7LO94864 414 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 BPGMP07738 259 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 FTH1P19P0C7X4 201 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 CDK4P11802 303 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 EPB42P16452 691 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 PRDX3P30048 256 aaKnown RBP13.63□□□□□ -0.23
LINC00887-204ENST00000456816 SLC18A1P54219 525 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 ABATP80404 500 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 CDC16Q13042 620 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 GTF2H2Q13888 395 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 PCBP2Q15366 365 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00887-204ENST00000456816 CLPPQ16740 277 aaPredicted RBP13.63□□□□□ -0.23
LINC00887-204ENST00000456816 SLC5A12Q1EHB4 618 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 PHF19Q5T6S3 580 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 CACHD1Q5VU97 1274 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 ICE2Q659A1 982 aa13.63□□□□□ -0.23
LINC00887-204ENST00000456816 GTF2H2CQ6P1K8 395 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms