RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ZNF285Q96NJ3 590 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 SELENOSQ9BQE4 189 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 SLC25A23Q9BV35 468 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 TRIM55Q9BYV6 548 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FBXO6Q9NRD1 293 aaPredicted RBP17.15■□□□□ 0.34
MSH6-207ENST00000456246 UTP6Q9NYH9 597 aaKnown RBP17.15■□□□□ 0.34
MSH6-207ENST00000456246 ANKMY1Q9P2S6 941 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 DHCR7Q9UBM7 475 aaKnown RBP17.15■□□□□ 0.34
MSH6-207ENST00000456246 FBXO5Q9UKT4 447 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 ARHGEF33A8MVX0 844 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 KLF7O75840 302 aaPredicted RBP17.14■□□□□ 0.33
MSH6-207ENST00000456246 CCNDBP1O95273 360 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 GCGRP47871 477 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 PGDP52209 483 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 CRYMQ14894 314 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 FAM214AQ32MH5 1076 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 CCSMST1Q4G0I0 132 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.14■□□□□ 0.33
MSH6-207ENST00000456246 PAPD7Q5XG87 772 aaKnown RBP17.14■□□□□ 0.33
MSH6-207ENST00000456246 UGT3A1Q6NUS8 523 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 KCNMB4Q86W47 210 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 AGGF1Q8N302 714 aaeCLIP17.14■□□□□ 0.33
MSH6-207ENST00000456246 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 OR2Y1Q8NGV0 311 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 NACC2Q96BF6 587 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 PDLIM2Q96JY6 352 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 MIPEPQ99797 713 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 EBNA1BP2Q99848 306 aaKnown RBP17.14■□□□□ 0.33
MSH6-207ENST00000456246 TRIM4Q9C037 500 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 EPN3Q9H201 632 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 MLXIPLQ9NP71 852 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 KLHL20Q9Y2M5 609 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 DHRS7Q9Y394 339 aa17.14■□□□□ 0.33
MSH6-207ENST00000456246 FLNBO75369 2602 aaKnown RBP17.13■□□□□ 0.33
MSH6-207ENST00000456246 A0A1W2PPV9 198 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 FITM1A5D6W6 292 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 DSCR3O14972 297 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 KLHL41O60662 606 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 VPS26AO75436 327 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 CEACAM4O75871 244 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 DNAJB5O75953 348 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 ONECUT2O95948 504 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 ALBP02768 609 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 GNG11P61952 73 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 MORF4L2Q15014 288 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 HSP90AA5PQ58FG0 334 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 CPZQ66K79 652 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 MRPL14Q6P1L8 145 aaKnown RBP17.13■□□□□ 0.33
MSH6-207ENST00000456246 KIAA0408Q6ZU52 694 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 RNF44Q7L0R7 432 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 PTERQ96BW5 349 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 FER1L6-AS2Q96M78 137 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
MSH6-207ENST00000456246 CUTCQ9NTM9 273 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 RNF14Q9UBS8 474 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 TSR3Q9UJK0 312 aaKnown RBP17.13■□□□□ 0.33
MSH6-207ENST00000456246 PTRH2Q9Y3E5 179 aaKnown RBP17.13■□□□□ 0.33
MSH6-207ENST00000456246 SAR1BQ9Y6B6 198 aa17.13■□□□□ 0.33
MSH6-207ENST00000456246 CCDC188H7C350 402 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 PEX12O00623 359 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 ZBTB14O43829 449 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 ALAS2P22557 587 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 PSMB5P28074 263 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 RPA3P35244 121 aaPredicted RBP17.12■□□□□ 0.33
MSH6-207ENST00000456246 SKIV2L2P42285 1042 aaKnown RBP17.12■□□□□ 0.33
MSH6-207ENST00000456246 CCL11P51671 97 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 ZNF549Q6P9A3 640 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 TTLL10Q6ZVT0 673 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 MRGPREQ86SM8 312 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 C2CD4AQ8NCU7 369 aaPredicted RBP17.12■□□□□ 0.33
MSH6-207ENST00000456246 GIMAP7Q8NHV1 300 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 CD200R1Q8TD46 325 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 ASB11Q8WXH4 323 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 LRRC39Q96DD0 335 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 GPR21Q99679 349 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 ZFYVE21Q9BQ24 234 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 AARSD1Q9BTE6 412 aaKnown RBP17.12■□□□□ 0.33
MSH6-207ENST00000456246 WDR54Q9H977 334 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 NXT1Q9UKK6 140 aaKnown RBP17.12■□□□□ 0.33
MSH6-207ENST00000456246 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 ZNF451Q9Y4E5 1061 aa17.12■□□□□ 0.33
MSH6-207ENST00000456246 MED13Q9UHV7 2174 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 OR2A25A4D2G3 310 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 GFYI3L273 518 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 NDC80O14777 642 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 CTSVO60911 334 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 CTSBP07858 339 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 NR1D1P20393 614 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 OTX2P32243 289 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 PAFAH1B1P43034 410 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 RGS4P49798 205 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 PNLIPRP1P54315 467 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 ABATP80404 500 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 DR1Q01658 176 aa17.11■□□□□ 0.33
MSH6-207ENST00000456246 DHX9Q08211 1270 aaKnown RBP17.11■□□□□ 0.33
MSH6-207ENST00000456246 CHAF1BQ13112 559 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms