RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 MATR3P43243 847 aaKnown RBP eCLIP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 NRIP1P48552 1158 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 ZNF131P52739 623 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 MAZP56270 477 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 PKN2Q16513 984 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 HLA-BQ31612 363 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 KLHL26Q53HC5 615 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 FASTKD1Q53R41 847 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 C1orf141Q5JVX7 400 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 ELFN2Q5R3F8 820 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 PLBD1Q6P4A8 553 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 SHQ1Q6PI26 577 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 DOK6Q6PKX4 331 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 KRT74Q7RTS7 529 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 KBTBD6Q86V97 674 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 TMEM173Q86WV6 379 aaPredicted RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 HOGA1Q86XE5 327 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 LMNTD2Q8IXW0 634 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 CDK20Q8IZL9 346 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 KIRREL3Q8IZU9 778 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 SPAG16Q8N0X2 631 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 TAGAPQ8N103 731 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 NAT8LQ8N9F0 302 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 NPEPL1Q8NDH3 523 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 PTPMT1Q8WUK0 201 aaPredicted RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 MS4A10Q96PG2 267 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 PKP2Q99959 881 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 URM1Q9BTM9 101 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 SERINC1Q9NRX5 453 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 STK26Q9P289 416 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 MTRRQ9UBK8 725 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 EPHA6Q9UF33 1036 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 LRWD1Q9UFC0 647 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 WBP11Q9Y2W2 641 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 PTRH2Q9Y3E5 179 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 GPRASP1Q5JY77 1395 aa3.12□□□□□ -1.91
R3HDM1-212ENST00000456040 SMARCA4P51532 1647 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 MYH15Q9Y2K3 1946 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 TOP2AP11388 1531 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 KPNA7A9QM74 516 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 TBCAO75347 108 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PGM3O95394 542 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 DUS4LO95620 317 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 BAG2O95816 211 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PSMA3P25788 255 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 NNMTP40261 264 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 MNDAP41218 407 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 HUNKP57058 714 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 SLC8A3P57103 927 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 DSCR10P59022 87 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 STK4Q13043 487 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 DRP2Q13474 957 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PRPF4BQ13523 1007 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 SMC1AQ14683 1233 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 UGP2Q16851 508 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 ODF4Q2M2E3 257 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PHLDA2Q53GA4 152 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PDLIM3Q53GG5 364 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 BMP2KLQ5H9B9 411 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 GPR139Q6DWJ6 353 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 NAA16Q6N069 864 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 TEX38Q6PEX7 206 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 IL27RAQ6UWB1 636 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 CCDC91Q7Z6B0 441 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PTAR1Q7Z6K3 402 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 LRRTM1Q86UE6 522 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 NUDT13Q86X67 352 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 EID3Q8N140 333 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 OR8H3Q8N146 312 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 GUF1Q8N442 669 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 OR8H1Q8NGG4 311 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 OR10G8Q8NGN5 311 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 OR52N5Q8NH56 324 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 DHX58Q96C10 678 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 USP28Q96RU2 1077 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 TBC1D17Q9HA65 648 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 XAB2Q9HCS7 855 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 PPANQ9NQ55 473 aaKnown RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 SLC7A10Q9NS82 523 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 P4HTMQ9NXG6 502 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 DPP3Q9NY33 737 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 CHORDC1Q9UHD1 332 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 DAPK2Q9UIK4 370 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 MROH2BQ7Z745 1585 aa3.11□□□□□ -1.91
R3HDM1-212ENST00000456040 COL5A2P05997 1499 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 CECR2Q9BXF3 1484 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 PEG3Q9GZU2 1588 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 BICRAQ9NZM4 1560 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 LOC102723996A0A087X1L8 192 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 GPR75-ASB3A0A0A6YYF3 556 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 A8MV72 311 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 ADAMDEC1O15204 470 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 IPO8O15397 1037 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 CLDN1O95832 211 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 BCL10O95999 233 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 HSPA8P11142 646 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 CDH3P22223 829 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 RPL21P46778 160 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 STAT2P52630 851 aa3.1□□□□□ -1.91
R3HDM1-212ENST00000456040 PPP5CP53041 499 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms