RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 NOL11Q9H8H0 719 aaKnown RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 MARCOQ9UEW3 520 aaPredicted RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 DOLKQ9UPQ8 538 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 LY6G6EA0A0G2JKS1 128 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 K7EPI3 171 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 PRICKLE3O43900 615 aaPredicted RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 NPHS1O60500 1241 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 OR4F21O95013 312 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 JUNP05412 331 aaKnown RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 VIMP08670 466 aaKnown RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CCNYL3P0C7X3 344 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 KITP10721 976 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CD22P20273 847 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 SERPINB3P29508 390 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 PKLRP30613 574 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 HOXD12P35452 270 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 ERVPABLB-1P60509 514 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 PPP1CAP62136 330 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 KRT33BQ14525 404 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CFAP157Q5JU67 520 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CDKL4Q5MAI5 379 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 MAVSQ7Z434 540 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 ZNF438Q7Z4V0 828 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 RAB44Q7Z6P3 723 aaPredicted RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 SLC35F3Q8IY50 421 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 KLHDC8AQ8IYD2 350 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 AGAP11Q8TF27 550 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CHMP6Q96FZ7 201 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 LOXL4Q96JB6 756 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 CNDP1Q96KN2 507 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 PPM1MQ96MI6 270 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 ACAT2Q9BWD1 397 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 SGPP1Q9BX95 441 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 FAM107BQ9H098 131 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 NSRP1Q9H0G5 558 aaKnown RBP10.62□□□□□ -0.71
SCN9A-205ENST00000454569 IPPKQ9H8X2 491 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 EVA1BQ9NVM1 165 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 THAP1Q9NVV9 213 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 OPTCQ9UBM4 332 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 BTBD3Q9Y2F9 522 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 U3KQA8 63 aa10.62□□□□□ -0.71
SCN9A-205ENST00000454569 KIR2DS5A0A0G2JLQ3 304 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 A0A0G2JNG1 304 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 LNP1A1A4G5 178 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 TMEM114B3SHH9 223 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 E7EQ34 232 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 KIR2DS3K7RE56 304 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 NDUFAB1O14561 156 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 NRP2O60462 931 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 KATNA1O75449 491 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 FAM107AO95990 144 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 VIPP01282 170 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 GRK2P25098 689 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 MAPK9P45984 424 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 PIK3CGP48736 1102 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 ARRB1P49407 418 aaPredicted RBP10.61□□□□□ -0.71
SCN9A-205ENST00000454569 HNMTP50135 292 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 HHEXQ03014 270 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 TRAF3Q13114 568 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 KIR2DS5Q14953 304 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 CATSPEREQ5SY80 951 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 ATG16L1Q676U5 607 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 CLEC6AQ6EIG7 209 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 LETMD1Q6P1Q0 360 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 TTC23LQ6PF05 361 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 CPLX4Q7Z7G2 160 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 CUZD1Q86UP6 607 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 ADGRF3Q8IZF5 1079 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 OR2L8Q8NGY9 312 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 RFWD2Q8NHY2 731 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 FLVCR1-AS1Q8TAF5 88 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 RAB3IL1Q8TBN0 382 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 MAPK15Q8TD08 544 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 PPP4R1Q8TF05 950 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 NEIL2Q969S2 332 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 TWSG1Q9GZX9 223 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 SPNS1Q9H2V7 528 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 MID1IP1Q9NPA3 183 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 POLG2Q9UHN1 485 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 TMCO1Q9UM00 188 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 KLHL20Q9Y2M5 609 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 RNF11Q9Y3C5 154 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 FIS1Q9Y3D6 152 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 TIMM22Q9Y584 194 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 HEBP2Q9Y5Z4 205 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 CSNK1G3Q9Y6M4 447 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 RNF215Q9Y6U7 377 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 COLEC10Q9Y6Z7 277 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 SCN3AQ9NY46 2000 aa10.61□□□□□ -0.71
SCN9A-205ENST00000454569 ZNF195O14628 629 aa10.6□□□□□ -0.71
SCN9A-205ENST00000454569 HSPA4LO95757 839 aa10.6□□□□□ -0.71
SCN9A-205ENST00000454569 RPN2P04844 631 aa10.6□□□□□ -0.71
SCN9A-205ENST00000454569 VARSP26640 1264 aaKnown RBP10.6□□□□□ -0.71
SCN9A-205ENST00000454569 RAB28P51157 221 aa10.6□□□□□ -0.71
SCN9A-205ENST00000454569 MEF2AQ02078 507 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-205ENST00000454569 SPEM2Q0P670 501 aa10.6□□□□□ -0.71
SCN9A-205ENST00000454569 RBBP7Q16576 425 aa10.6□□□□□ -0.71
SCN9A-205ENST00000454569 UGT3A2Q3SY77 523 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms