RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RORAP35398 523 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 GRIA3P42263 894 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 GRTP1Q5TC63 336 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 INO80CQ6PI98 192 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 C19orf48Q6RUI8 117 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 ZNF517Q6ZMY9 492 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 RNF44Q7L0R7 432 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 VASH2Q86V25 355 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 CACNA2D3Q8IZS8 1091 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 NKAPQ8N5F7 415 aaKnown RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 CCDC138Q96M89 665 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 PARVBQ9HBI1 364 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 SLC6A20Q9NP91 592 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 INTS7Q9NVH2 962 aaKnown RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 ANKMY1Q9P2S6 941 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 NOVA2Q9UNW9 492 aaKnown RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
HDAC4-205ENST00000454542 FER1L5A0AVI2 2057 aa13.63□□□□□ -0.23
HDAC4-205ENST00000454542 IGKV1-8A0A0C4DH67 115 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 TARM1B6A8C7 271 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 SCRG1O75711 98 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 KRT37O76014 449 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 MT-ND3P03897 115 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 ITGA1P56199 1179 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 AP1S2P56377 157 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 TBPL1P62380 186 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 NAA25Q14CX7 972 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 ZXDCQ2QGD7 858 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-205ENST00000454542 DEFB110Q30KQ9 67 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 MANEAQ5SRI9 462 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 ZNF385CQ66K41 422 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-205ENST00000454542 ZNF425Q6IV72 752 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 FIGLAQ6QHK4 219 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 C6orf15Q6UXA7 325 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-205ENST00000454542 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 CTAGE3PQ8IX95 158 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 GALNT6Q8NCL4 622 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 PPFIBP2Q8ND30 876 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 ANKRD49Q8WVL7 239 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 IFT81Q8WYA0 676 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 ZUFSPQ96AP4 578 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 MIPEPQ99797 713 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 TXNDC16Q9P2K2 825 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
HDAC4-205ENST00000454542 LOC101059948A0A1B0GTJ6 334 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 HMX2A2RU54 273 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 MAP3K7O43318 606 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 NRP2O60462 931 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 FAM155BO75949 473 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CCNDBP1O95273 360 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CTSBP07858 339 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 ABHD2P08910 425 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 LIFP15018 202 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CMPK1P30085 196 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 PHBP35232 272 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 SPRP35270 261 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-205ENST00000454542 YBX1P67809 324 aaKnown RBP13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CDKL1Q00532 357 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 VAC14Q08AM6 782 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 GPS2Q13227 327 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 SF1Q15637 639 aaKnown RBP13.61□□□□□ -0.23
HDAC4-205ENST00000454542 ICE2Q659A1 982 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 SUSD1Q6UWL2 747 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 ADAMTSL2Q86TH1 951 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 PAQR7Q86WK9 346 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 TMEM126BQ8IUX1 230 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 IFT20Q8IY31 132 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 SYTL1Q8IYJ3 562 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 IL22RA1Q8N6P7 574 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 EIF1ADQ8N9N8 165 aaKnown RBP13.61□□□□□ -0.23
HDAC4-205ENST00000454542 SLC38A9Q8NBW4 561 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 MCOLN3Q8TDD5 553 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 ISL2Q96A47 359 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 TSPAN17Q96FV3 270 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CYTH2Q99418 400 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 SGPP1Q9BX95 441 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 TXLNGYQ9BZA5 131 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 DERL2Q9GZP9 239 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CAB39LQ9H9S4 337 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 LHX9Q9NQ69 397 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 PCMTD2Q9NV79 361 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 EURLQ9NYK6 297 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 TAC3Q9UHF0 121 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 NFU1Q9UMS0 254 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 LHX6Q9UPM6 363 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 PLCL2Q9UPR0 1127 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 PCDHGA4Q9Y5G9 962 aa13.61□□□□□ -0.23
HDAC4-205ENST00000454542 HEATR5BQ9P2D3 2071 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 E7EQ34 232 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 PHGDHO43175 533 aaKnown RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 CTSVO60911 334 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 SYF2O95926 243 aaKnown RBP13.6□□□□□ -0.23
HDAC4-205ENST00000454542 RHOXF2BP0C7M4 288 aa13.6□□□□□ -0.23
HDAC4-205ENST00000454542 STMN1P16949 149 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms