RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ICAM2P13598 275 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CXCR2P25025 360 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 EIF3EP60228 445 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 KLC1Q07866 573 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 OLIG2Q13516 323 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 SF1Q15637 639 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 PARP6Q2NL67 630 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 MUM1Q2TAK8 710 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 TTC23LQ6PF05 361 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CNSTQ6PJW8 725 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 FIGLAQ6QHK4 219 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 LINC00523Q86TU6 105 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 LMNTD1Q8N9Z9 388 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CATSPER1Q8NEC5 780 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 SUN3Q8TAQ9 357 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 HMGCLL1Q8TB92 370 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 STT3BQ8TCJ2 826 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 TAAR6Q96RI8 345 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CHP1Q99653 195 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 ZNF160Q9HCG1 818 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 TEKT2Q9UIF3 430 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CDC14AQ9UNH5 594 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 PCDHGB6Q9Y5F9 930 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 CELSR1Q9NYQ6 3014 aa13.65□□□□□ -0.22
LYSMD3-202ENST00000453259 TRGV8A0A0C4DH27 118 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 MACROD2A1Z1Q3 448 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 HYKKA2RU49 373 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 CCL21O00585 134 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 RASGRF2O14827 1237 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 GPC4O75487 556 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 TJP3O95049 919 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 RASAL1O95294 804 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 MLYCDO95822 493 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 APOA4P06727 396 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 CYC1P08574 325 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 CTNNA1P35221 906 aaKnown RBP13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 SMSP52788 366 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 KCNK10P57789 538 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 TMED2Q15363 201 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 DARS2Q6PI48 645 aaKnown RBP13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 ARHGEF18Q6ZSZ5 1173 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 TMEM151BQ8IW70 566 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 PSMF1Q92530 271 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 HEMGNQ9BXL5 484 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 TRIM8Q9BZR9 551 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 SEC14L3Q9UDX4 400 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 SLC39A10Q9ULF5 831 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 PLAGL1Q9UM63 463 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 CSMD2Q7Z408 3487 aa13.64□□□□□ -0.23
LYSMD3-202ENST00000453259 SNRNP200O75643 2136 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 ERI2A8K979 691 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 SLCO2B1O94956 709 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 UNC5CO95185 931 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 GAS8O95995 478 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 COX6A1P12074 109 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 FOXN2P32314 431 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 OR1D4P47884 311 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 MARCKSL1P49006 195 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 DSG2Q14126 1118 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 POU6F1Q14863 301 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 BRD3Q15059 726 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 LONRF1Q17RB8 773 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 AARS2Q5JTZ9 985 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 WASHC2DQ5SRD0 308 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 AFTPHQ6ULP2 937 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 SPNS3Q6ZMD2 512 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 SHISA6Q6ZSJ9 500 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 PEX13Q92968 403 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 RAD51AP1Q96B01 352 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 C14orf79Q96F83 325 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 OSBPL8Q9BZF1 889 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 TGIF2Q9GZN2 237 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 PRSS21Q9Y6M0 314 aa13.63□□□□□ -0.23
LYSMD3-202ENST00000453259 LOC102723996A0A087X1L8 192 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 IGHV1-45A0A0A0MS14 117 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 KPNA5O15131 536 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 PRICKLE3O43900 615 aaPredicted RBP13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 KRT38O76015 456 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 WFS1O76024 890 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 UQCRHP07919 91 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 PRSS56P0CW18 603 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 ERVK-10P10266 1014 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 FBLP22087 321 aaKnown RBP13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 MCM3P25205 808 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 CCNFP41002 786 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 GRIA3P42263 894 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 HSPA14Q0VDF9 509 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 GRB7Q14451 532 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 SPARCL1Q14515 664 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 RNF44Q7L0R7 432 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 FAM20CQ8IXL6 584 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 GSDMBQ8TAX9 411 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 MAGEC3Q8TD91 643 aa13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 BRIX1Q8TDN6 353 aaKnown RBP13.62□□□□□ -0.23
LYSMD3-202ENST00000453259 THAP3Q8WTV1 239 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms