RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PSMD4P55036 377 aaKnown RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 FOXA1P55317 472 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 MAZP56270 477 aaKnown RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 ZNF155Q12901 538 aaPredicted RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 CMTR2Q8IYT2 770 aaKnown RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 QRFPRQ96P65 431 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 KIAA1522Q9P206 1035 aaPredicted RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 PSMA1P25786 263 aaKnown RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 ARSDP51689 593 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 SCN1BQ07699 218 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 FCHO2Q0JRZ9 810 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 SF1Q15637 639 aaKnown RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 HYAL4Q2M3T9 481 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 CDCA2Q69YH5 1023 aaPredicted RBP7.57□□□□□ -1.2
RIF1-206ENST00000453091 ERICH5Q6P6B1 374 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 ZFP41Q8N8Y5 198 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 SLC35A5Q9BS91 424 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 XYLT2Q9H1B5 865 aa7.57□□□□□ -1.2
RIF1-206ENST00000453091 SH3D21A4FU49 640 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 FGBP02675 491 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 CPN2P22792 545 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 ITPKBP27987 946 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 SLC18A1P54219 525 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 NANOGP8Q6NSW7 305 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 SLC30A6Q6NXT4 461 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 PTCD2Q8WV60 388 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 IRGQQ8WZA9 623 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 WACQ9BTA9 647 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 NANOGQ9H9S0 305 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 COMMD9Q9P000 198 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 NCKAP1Q9Y2A7 1128 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 LOC100509620A0A075B734 347 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 A0A1W2PPK0 400 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 TRBC2A0A5B9 178 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 HCN1O60741 890 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 KDM4BO94953 1096 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 C6orf47O95873 294 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 OR4D1Q15615 310 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 TMEM53Q6P2H8 277 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 TIFABQ6ZNK6 161 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 OR4K1Q8NGD4 311 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 HDAC2Q92769 488 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 COL21A1Q96P44 957 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 NUSAP1Q9BXS6 441 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 TLE6Q9H808 572 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 ZNF780BQ9Y6R6 833 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 A0A1W2PRB8 838 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 SLC30A4O14863 429 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 KERAO60938 352 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 TRIM3O75382 744 aaPredicted RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 STX11O75558 287 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 GJB5O95377 273 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 HLA-EP13747 358 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 AGXTP21549 392 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 PREPP48147 710 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 LSAMPQ13449 338 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 BTBD16Q32M84 506 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 GFOD2Q3B7J2 385 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 GALNTL5Q7Z4T8 443 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 ADGRG6Q86SQ4 1221 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 RNASE11Q8TAA1 199 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 NDNFQ8TB73 568 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 FRS2Q8WU20 508 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 TSEN15Q8WW01 171 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 TEPSINQ96N21 525 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 CXCL16Q9H2A7 254 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 MAPRE3Q9UPY8 281 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 ADH1AP07327 375 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 OGNP20774 298 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 NCS1P62166 190 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 TXNL4AP83876 142 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 HSF2Q03933 536 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 SLBPQ14493 270 aaKnown RBP eCLIP7.56□□□□□ -1.2
RIF1-206ENST00000453091 PABPC1LQ4VXU2 614 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 UBXN11Q5T124 520 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 LYPLAL1Q5VWZ2 237 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 SUSD1Q6UWL2 747 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 ZNF354BQ96LW1 612 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 MRPL15Q9P015 296 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 OR6C75A6NL08 312 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 M0QX08 132 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 FZD9O00144 591 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 PMM2O15305 246 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 CBLP22681 906 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 CSTF2P33240 577 aaKnown RBP eCLIP7.56□□□□□ -1.2
RIF1-206ENST00000453091 CDKN1CP49918 316 aaPredicted RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 ARSFP54793 590 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 RGS8P57771 180 aaPredicted RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 SNRPD2P62316 118 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 CREMQ03060 361 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 MOGQ16653 247 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 OGFRL1Q5TC84 451 aaPredicted RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 PSAPL1Q6NUJ1 521 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 C12orf76Q8N812 135 aaPredicted RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 TEFMQ96QE5 360 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 THUMPD1Q9NXG2 353 aaKnown RBP7.56□□□□□ -1.2
RIF1-206ENST00000453091 TMEM98Q9Y2Y6 226 aa7.56□□□□□ -1.2
RIF1-206ENST00000453091 PCDHB3Q9Y5E6 796 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms