RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 POLDIP3Q9BY77 421 aaKnown RBP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 PPP1R3EQ9H7J1 279 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 ANKZF1Q9H8Y5 726 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 MSRB1Q9NZV6 116 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 AGO2Q9UKV8 859 aaKnown RBP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 COG5Q9UP83 839 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 RALGAPA2Q2PPJ7 1873 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 MYO9BQ13459 2157 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ANXA2P2A6NMY6 339 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 H3BNX3 289 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 M0QZ24 198 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF263O14978 683 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 CLIC2O15247 247 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 KINO60870 393 aaKnown RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 CA3P07451 260 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 MMP3P08254 477 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SNRNP70P08621 437 aaKnown RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 IQCF3P0C7M6 154 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 VPREB1P12018 145 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 MYOGP15173 224 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 UBA1P22314 1058 aaKnown RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 CCND2P30279 289 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 GABRA5P31644 462 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 LINC00205P59089 165 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 HNRNPKP61978 463 aaKnown RBP eCLIP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SIRPAP78324 504 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ARHGAP1Q07960 439 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ACSM1Q08AH1 577 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 WASHC5Q12768 1159 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 RCN2Q14257 317 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 TYSND1Q2T9J0 566 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 VWC2Q2TAL6 325 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 QRICH1Q2TAL8 776 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SMU1Q2TAY7 513 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 MYLK3Q32MK0 819 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 KRTCAP3Q53RY4 240 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 C6orf10Q5SRN2 563 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ASPHD1Q5U4P2 390 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 NCAPH2Q6IBW4 605 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 PAPD4Q6PIY7 484 aaKnown RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 COLCA1Q6ZS62 124 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ZBTB49Q6ZSB9 765 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 PIM3Q86V86 326 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 HOOK3Q86VS8 718 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 MFN1Q8IWA4 741 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SFTPA2Q8IWL1 248 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 OR1J2Q8NGS2 313 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ARNTL2Q8WYA1 636 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 CCDC47Q96A33 483 aaKnown RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 EXOC4Q96A65 974 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 GRAMD2BQ96HH9 432 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 TAAR1Q96RJ0 339 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SMC6Q96SB8 1091 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 CPVLQ9H3G5 476 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 RAD21L1Q9H4I0 556 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SEBOXQ9HB31 216 aaPredicted RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 PXMP2Q9NR77 195 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ADPRHL2Q9NX46 363 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 ARMCX3Q9UH62 379 aaPredicted RBP4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SLC24A2Q9UI40 661 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 B3GALT5Q9Y2C3 310 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 SQORQ9Y6N5 450 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 TTC3P53804 2025 aa4.22□□□□□ -1.73
LINC00393-202ENST00000452852 C5orf42Q9H799 3197 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 LOXHD1Q8IVV2 1947 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TET1Q8NFU7 2136 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 A0A0G2JK05 382 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 KANSL1LA0AUZ9 987 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TMEM8BA6NDV4 472 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 KDM4EB2RXH2 506 aaPredicted RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TRIM77I1YAP6 450 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 IFIT3O14879 490 aaKnown RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 ZBTB5O15062 677 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 STX6O43752 255 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 KERAO60938 352 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 NDUFB4O95168 129 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 EGFP01133 1207 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 FGF2P09038 288 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 LINGO3P0C6S8 592 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 POLR2MP0CAP2 368 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 ZNF286BP0CG31 522 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TNFRSF1BP20333 461 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 MAOAP21397 527 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 SCP2P22307 547 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 PTPN3P26045 913 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 CHATP28329 748 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 PCGF2P35227 344 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 MTHFRP42898 656 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 FOXG1P55316 489 aaPredicted RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 GRIK2Q13002 908 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 FHL1Q13642 323 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 NEDD9Q14511 834 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 MEP1BQ16820 701 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 KLHL26Q53HC5 615 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 MANEAQ5SRI9 462 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 GGNBP1Q5YKI7 109 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms