RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ACVR1Q04771 509 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 CHAF1BQ13112 559 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 IL10RAQ13651 578 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 KIR2DS3Q14952 304 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 FASTKD3Q14CZ7 662 aaKnown RBP20.87■□□□□ 0.93
C9orf3-208ENST00000451893 KLHL38Q2WGJ6 581 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 KRT71Q3SY84 523 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 COLEC12Q5KU26 742 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 AGBL2Q5U5Z8 902 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 SDCCAG8Q86SQ7 713 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-208ENST00000451893 RAB43Q86YS6 212 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 ANKMY2Q8IV38 441 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 DCUN1D3Q8IWE4 304 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 SLC22A15Q8IZD6 547 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 RIBC1Q8N443 379 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-208ENST00000451893 SLC22A18Q96BI1 424 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 PGM2Q96G03 612 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 FOPNLQ96NB1 174 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 OR2A14Q96R47 310 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 PCMTD2Q9NV79 361 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 INTS7Q9NVH2 962 aaKnown RBP20.87■□□□□ 0.93
C9orf3-208ENST00000451893 NDOR1Q9UHB4 597 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 TCFL5Q9UL49 500 aa20.87■□□□□ 0.93
C9orf3-208ENST00000451893 IQCF5A8MTL0 148 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 HMGB1P1B2RPK0 211 aaPredicted RBP20.86■□□□□ 0.93
C9orf3-208ENST00000451893 KPNA5O15131 536 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 AVILO75366 819 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 STX2P32856 288 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 RAB28P51157 221 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 FRG1Q14331 258 aaKnown RBP20.86■□□□□ 0.93
C9orf3-208ENST00000451893 MLIPQ5VWP3 458 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 CASC4Q6P4E1 433 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 OTOAQ7RTW8 1153 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 TAX1BP1Q86VP1 789 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 TDRPQ86YL5 185 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 ING2Q9H160 280 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 SPHK1Q9NYA1 384 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 SAMD15Q9P1V8 674 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 CHMP2BQ9UQN3 213 aa20.86■□□□□ 0.93
C9orf3-208ENST00000451893 SHBGP04278 402 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 ATP5DP30049 168 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 RORAP35398 523 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 GPX6P59796 221 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 SEMA3AQ14563 771 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 NCF4Q15080 339 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 SLC5A12Q1EHB4 618 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 C1orf189Q5VU69 101 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 CPZQ66K79 652 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 MRNIPQ6NTE8 343 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 MPP5Q8N3R9 675 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 OR2W6PQ8NHA6 318 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 SGSM3Q96HU1 749 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 CYTH2Q99418 400 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 NDC1Q9BTX1 674 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 RAB11FIP5Q9BXF6 653 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 TRIM55Q9BYV6 548 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 ACSS3Q9H6R3 686 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 CIDEBQ9UHD4 219 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 SRPK3Q9UPE1 567 aa20.85■□□□□ 0.93
C9orf3-208ENST00000451893 ZSCAN9O15535 394 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-208ENST00000451893 CDH16O75309 829 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 CD63P08962 238 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 PGAM1P18669 254 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 PAMP19021 973 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 MGAT1P26572 445 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 PKLRP30613 574 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 OTX2P32243 289 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 RRADP55042 308 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 STEAP4Q687X5 459 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 LCN10Q6JVE6 187 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 UNC5DQ6UXZ4 953 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 ATCAYQ86WG3 371 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 LRRC6Q86X45 466 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 C2orf73Q8N5S3 287 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-208ENST00000451893 ZNF655Q8N720 491 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-208ENST00000451893 EFCAB3Q8N7B9 438 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 LKAAEAR1Q8TD35 194 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 ATP6V1G3Q96LB4 118 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 DHRS4Q9BTZ2 278 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 FAM60AQ9NP50 221 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 IFT80Q9P2H3 777 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-208ENST00000451893 PLCL2Q9UPR0 1127 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 MAD1L1Q9Y6D9 718 aa20.84■□□□□ 0.93
C9orf3-208ENST00000451893 TNRC6AQ8NDV7 1962 aaKnown RBP20.84■□□□□ 0.93
C9orf3-208ENST00000451893 SNRNP200O75643 2136 aaKnown RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 NMBRP28336 390 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 FOLR3P41439 243 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 ZNF789Q5FWF6 425 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 HP1BP3Q5SSJ5 553 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 RNF187Q5TA31 235 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 TLDC1Q6P9B6 456 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 FAM198BQ6UWH4 519 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 ZNF517Q6ZMY9 492 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 VRK3Q8IV63 474 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 IGDCC3Q8IVU1 814 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 WDR83Q9BRX9 315 aaKnown RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 SPRTNQ9H040 489 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 SYBUQ9NX95 663 aa20.83■□□□□ 0.93
C9orf3-208ENST00000451893 MARCH4Q9P2E8 410 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-208ENST00000451893 TSR3Q9UJK0 312 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms