RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 THAP1Q9NVV9 213 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 GPRC5BQ9NZH0 403 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 ANKRD12Q6UB98 2062 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 RHPN2P1A8MT19 583 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 OR7A17O14581 309 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 FLRT2O43155 660 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 KATNA1O75449 491 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 SNUPNO95149 360 aaKnown RBP13.58□□□□□ -0.24
SHMT2-203ENST00000449049 MLYCDO95822 493 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 CHRNGP07510 517 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 PNLIPP16233 465 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 NPPBP16860 134 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 PEBP1P30086 187 aaKnown RBP13.58□□□□□ -0.24
SHMT2-203ENST00000449049 GRK6P43250 576 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 OCRLQ01968 901 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 CDC16Q13042 620 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 PROX2Q3B8N5 592 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 ARL13AQ5H913 290 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-203ENST00000449049 TRPC4APQ8TEL6 797 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 SORT1Q99523 831 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 NOL11Q9H8H0 719 aaKnown RBP13.58□□□□□ -0.24
SHMT2-203ENST00000449049 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-203ENST00000449049 IPPKQ9H8X2 491 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 TMEM9BQ9NQ34 198 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 STK38LQ9Y2H1 464 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 ANGPTL3Q9Y5C1 460 aa13.58□□□□□ -0.24
SHMT2-203ENST00000449049 UBFD1O14562 309 aaKnown RBP13.57□□□□□ -0.24
SHMT2-203ENST00000449049 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-203ENST00000449049 LYPLA1O75608 230 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-203ENST00000449049 HSPA4LO95757 839 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 MYF5P13349 255 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 GPR3P46089 330 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 PCDH1Q08174 1060 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 TUBB8Q3ZCM7 444 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 SNX31Q8N9S9 440 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 OR2A1Q8NGT9 310 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 ZNF382Q96SR6 550 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 HAUS8Q9BT25 410 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 SPHK1Q9NYA1 384 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 PCDHB11Q9Y5F2 797 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 ENTPD2Q9Y5L3 495 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 EME2A4GXA9 379 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-203ENST00000449049 OR6C74A6NCV1 312 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 OR5K3A6NET4 321 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 TCP11X1B4DZS4 312 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 PPP6CO00743 305 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 UBXN7O94888 489 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 CKMT1AP12532 417 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 TSPAN8P19075 237 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 PSMB5P28074 263 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 LSP1P33241 339 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 GNGT1P63211 74 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 TSTA3Q13630 321 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-203ENST00000449049 KIR2DS3Q14952 304 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 OOSP2Q86WS3 158 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 OR52B6Q8NGF0 335 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 FLVCR1-AS1Q8TAF5 88 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 AGAP11Q8TF27 550 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 SLC22A18Q96BI1 424 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 C7orf26Q96N11 449 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 NTMT1Q9BV86 223 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 EML4Q9HC35 981 aaKnown RBP13.57□□□□□ -0.24
SHMT2-203ENST00000449049 ABCF3Q9NUQ8 709 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 TAC3Q9UHF0 121 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 HAO1Q9UJM8 370 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 KCNE2Q9Y6J6 123 aa13.57□□□□□ -0.24
SHMT2-203ENST00000449049 A0A1B0GTL3 188 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 PIPSLA2A3N6 862 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 OTCP00480 354 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 CD59P13987 128 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 CAPZBP47756 277 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 PKNOX1P55347 436 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 SH3BP2P78314 561 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 TRAF3Q13114 568 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 E2F2Q14209 437 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 RBBP7Q16576 425 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 THEMIS2Q5TEJ8 643 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 KLHL35Q6PF15 583 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 CUZD1Q86UP6 607 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 OR10G6Q8NH81 332 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 RSC1A1Q92681 617 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 NEIL2Q969S2 332 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 CCDC74AQ96AQ1 378 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 ZNF317Q96PQ6 595 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-203ENST00000449049 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 SLCO1B3Q9NPD5 702 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 HRASLS2Q9NWW9 162 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 ACTR10Q9NZ32 417 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 ZNF225Q9UK10 706 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 SH2B3Q9UQQ2 575 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-203ENST00000449049 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
SHMT2-203ENST00000449049 C2orf74A8MZ97 194 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 E7EQ34 232 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 PRAMEF4O60810 478 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 PROS1P07225 676 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms