RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IER5LQ5T953 404 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 UBE2Q1Q7Z7E8 422 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SCML4Q8N228 414 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 EXD3Q8N9H8 876 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR5L2Q8NGL0 311 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MCUR1Q96AQ8 359 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MSLNLQ96KJ4 702 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC39A3Q9BRY0 314 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GBA3Q9H227 469 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 DNAAF2Q9NVR5 837 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 EFR3BQ9Y2G0 817 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 DGKBQ9Y6T7 804 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCNX1Q96RV3 2341 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CHRNB1P11230 501 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPN2P22792 545 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 NOS3P29474 1203 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CTBSQ01459 385 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLD5Q8N7P1 536 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 FBXO36Q8NEA4 188 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 FAM76AQ8TAV0 307 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ANKRD49Q8WVL7 239 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 STARD8Q92502 1023 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PTCHD1Q96NR3 888 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRAPPC9Q96Q05 1148 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 HIST1H2AAQ96QV6 131 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CDADC1Q9BWV3 514 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLA2G2FQ9BZM2 168 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ISCUQ9H1K1 167 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRPV4Q9HBA0 871 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF226Q9NYT6 803 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC5A6Q9Y289 635 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 NOTCH2Q04721 2471 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 A0A0J9YYE9 177 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 LOC730098B7Z3J9 87 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPR89AB7ZAQ6 455 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 MT-CO1P00395 513 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 IL2RAP01589 272 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRBC1P01850 177 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 GSTM1P09488 218 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPR89BP0CG08 455 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CKMT1AP12532 417 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 KRT4P19013 534 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLK1P53350 603 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 GSTM4Q03013 218 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 VEZF1Q14119 521 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 DPYSL3Q14195 570 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 IRF4Q15306 451 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 AMIGO1Q86WK6 493 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SNX32Q86XE0 403 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF611Q8N823 705 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 AGR3Q8TD06 166 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 FCRL5Q96RD9 977 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 IL21Q9HBE4 155 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TAAR2Q9P1P5 351 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 GLS2Q9UI32 602 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMCO1Q9UM00 188 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIM33Q9UPN9 1127 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAPRE3Q9UPY8 281 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 hCG_1818297A0A087WSY0 165 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATP6AP2A0A1C7CYW4 349 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPNE3O75131 537 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATP6AP2O75787 350 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 C8GP07360 202 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 HRH2P25021 359 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 RPL3P39023 403 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 EPHA5P54756 1037 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 HSF2Q03933 536 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ART3Q13508 389 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TSC22D1Q15714 1073 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZC3H7AQ8IWR0 971 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 NEK7Q8TDX7 302 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCDHB18PQ96TA0 734 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCYOX1Q9UHG3 505 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 BOKQ9UMX3 212 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC12A4Q9UP95 1085 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZGRF1Q86YA3 2104 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SHANK3Q9BYB0 1731 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 LILRB5O75023 590 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CDC123O75794 336 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 EPOP01588 193 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 HNRNPCP07910 306 aaKnown RBP eCLIP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 F3P13726 295 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 OAS2P29728 719 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 OPRD1P41143 372 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CHRNEQ04844 493 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 KLRB1Q12918 225 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC14A1Q13336 389 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 VPS26BQ4G0F5 336 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 NOXRED1Q6NXP6 359 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 MIER2Q8N344 545 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ERP27Q96DN0 273 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SCRN2Q96FV2 425 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 THTPAQ9BU02 230 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 RBCK1Q9BYM8 510 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SOX17Q9H6I2 414 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 SNX12Q9UMY4 172 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TSC22D4Q9Y3Q8 395 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZFHX2Q9C0A1 2572 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 A0A1B0GUH1 482 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIM49D1C9J1S8 452 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms