RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 TJP3O95049 919 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 NDST3O95803 873 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 FTCDO95954 541 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 PCCBP05166 539 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 PYGLP06737 847 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 TNNT1P13805 278 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CKMT2P17540 419 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CTPS1P17812 591 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 RBL1P28749 1068 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 HMGCLP35914 325 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 SPINT3P49223 89 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 BLKP51451 505 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 THOP1P52888 689 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CDK3Q00526 305 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 COL10A1Q03692 680 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 DNAJC3Q13217 504 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 TP53BP2Q13625 1128 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 LLGL1Q15334 1064 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 SIX1Q15475 284 aaPredicted RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 OASLQ15646 514 aaKnown RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 ZNF542PQ5EBM4 170 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 KAZNQ674X7 775 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 KCTD11Q693B1 232 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 PDPK2PQ6A1A2 396 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 LVRNQ6Q4G3 990 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 RANBP10Q6VN20 620 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CCNI2Q6ZMN8 369 aaPredicted RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 B4GALNT4Q76KP1 1039 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 HEATR4Q86WZ0 1026 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CCDC50Q8IVM0 306 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 FSTL5Q8N475 847 aaPredicted RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 TTC30BQ8N4P2 665 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 EID2Q8N6I1 236 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 UBL4BQ8N7F7 174 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 BEND2Q8NDZ0 799 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 LPCAT1Q8NF37 534 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 OR56A4Q8NGH8 313 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 PDCD6IPQ8WUM4 868 aaKnown RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CNDP2Q96KP4 475 aaKnown RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 MLPHQ9BV36 600 aaPredicted RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 ADGRE3Q9BY15 652 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 CDH19Q9H159 772 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 ABCG8Q9H221 673 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 ARNT2Q9HBZ2 717 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 NCKIPSDQ9NZQ3 722 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 C11orf21Q9P2W6 132 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 DKK4Q9UBT3 224 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 FAM153AQ9UHL3 310 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 KLK13Q9UKR3 277 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 AMFRQ9UKV5 643 aa6.75□□□□□ -1.33
LINC00349-201ENST00000448748 PACSIN2Q9UNF0 486 aaPredicted RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 R3HDM2Q9Y2K5 976 aaKnown RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
LINC00349-201ENST00000448748 ATRXP46100 2492 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 URB1O60287 2271 aaKnown RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 C1orf232A0A0U1RR37 186 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 CCDC78A2IDD5 438 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 EME2A4GXA9 379 aaPredicted RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 C5orf60A6NFR6 353 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 NEMP2A6NFY4 417 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 A8MX80 341 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 ALG1L2C9J202 215 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 CACNB4O00305 520 aaPredicted RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 GAPDHSO14556 408 aaPredicted RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 YY2O15391 372 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SPDEFO95238 335 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 CLDN7O95471 211 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 LDOC1O95751 146 aaPredicted RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 IVLP07476 585 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 CCDC175P0C221 793 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 HLA-DPA1P20036 260 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 KELP23276 732 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 PSMA3P25788 255 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 HTR1BP28222 390 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SLC16A1P53985 500 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SRP54P61011 504 aaKnown RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 PPARDQ03181 441 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 OCA2Q04671 838 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 TARDBPQ13148 414 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 MPP3Q13368 585 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 ARHGEF7Q14155 803 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 GALNT3Q14435 633 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 NR1D2Q14995 579 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 ACOX1Q15067 660 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SLC1A5Q15758 541 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 ODF2Q5BJF6 829 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SIRPB2Q5JXA9 342 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 TMPRSS12Q86WS5 348 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 NRROSQ86YC3 692 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 CDKL3Q8IVW4 592 aaPredicted RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SLC35F3Q8IY50 421 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 NDUFAF2Q8N183 169 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 CHCHD4Q8N4Q1 142 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 PNPLA1Q8N8W4 532 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 DCBLD1Q8N8Z6 715 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 SCAMP4Q969E2 229 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 TSACCQ96A04 125 aaPredicted RBP6.74□□□□□ -1.33
LINC00349-201ENST00000448748 HAUS1Q96CS2 278 aa6.74□□□□□ -1.33
LINC00349-201ENST00000448748 AP2M1Q96CW1 435 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms