RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 QTRT2Q9H974 415 aaKnown RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 GCM1Q9NP62 436 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 ZNRF3Q9ULT6 936 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 NUP214P35658 2090 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 HMX3A6NHT5 357 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 MAGEB17A8MXT2 336 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 GADD45GO95257 159 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 THBS2P35442 1172 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 XKP51811 444 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF41P51814 821 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 RPL23AP62750 156 aaKnown RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 EN1Q05925 392 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 DPY19L1Q2PZI1 675 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ISLR2Q6UXK2 745 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 OR4Q3Q8NH05 313 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 HYLS1Q96M11 299 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 AGPAT3Q9NRZ7 376 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 MGAT4BQ9UQ53 548 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CMAHPQ9Y471 501 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 NPC1L1Q9UHC9 1359 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1B0GVI7 797 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 MT-ND5P03915 603 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 TSPAN8P19075 237 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SIM2Q14190 667 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF181Q2M3W8 571 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CRB2Q5IJ48 1285 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ANKK1Q8NFD2 765 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 OSTF1Q92882 214 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 BPIFA2Q96DR5 249 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ADAD1Q96M93 576 aaKnown RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ZDHHC4Q9NPG8 344 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 DCP1AQ9NPI6 582 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PCDHB1Q9Y5F3 818 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 FRMPD4Q14CM0 1322 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1W2PQ67 120 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CBY3A6NI87 242 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 MPPED1O15442 326 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SGCEO43556 437 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SC5DO75845 299 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SLITRK5O94991 958 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 NSA2O95478 260 aaKnown RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PTPRAP18433 802 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 EDNRAP25101 427 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 AIF1P55008 147 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 FAAP100Q0VG06 881 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 TARDBPQ13148 414 aaKnown RBP eCLIP8.76□□□□□ -1.013e-8■■■■□ 26.4
NIPBL-202ENST00000448238 ALX1Q15699 326 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CNKSR3Q6P9H4 555 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ASPNQ9BXN1 380 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 POLR2J3Q9H1A7 115 aaKnown RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 MIOSQ9NXC5 875 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PLK2Q9NYY3 685 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PCDHGA1Q9Y5H4 931 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 NACAE9PAV3 2078 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CUL7Q14999 1698 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CACNA1DQ01668 2161 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ANKRD28O15084 1053 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 TP73O15350 636 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CD53P19397 219 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 KLRC2P26717 231 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PRDX6P30041 224 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CDC25CP30307 473 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ERVK-16P61578 105 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ADIGQ0VDE8 80 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PAN2Q504Q3 1202 aaKnown RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 IFI44LQ53G44 452 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SLC36A4Q6YBV0 504 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 NCCRP1Q6ZVX7 275 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SGMS1Q86VZ5 419 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 DENND1AQ8TEH3 1009 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CDKN2AIPNLQ96HQ2 116 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 JSRP1Q96MG2 331 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ADAM2Q99965 735 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 RBCK1Q9BYM8 510 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 HACL1Q9UJ83 578 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ARAP1Q96P48 1450 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SEPT4O43236 478 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 TSFMP43897 325 aaKnown RBP8.76□□□□□ -1.01
NIPBL-202ENST00000448238 GABRB2P47870 512 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 RAB8AP61006 207 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 GPR142Q7Z601 462 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SVBPQ8N300 66 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 OR10A6Q8NH74 314 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CDC6Q99741 560 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 DUSP16Q9BY84 665 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ABCC13Q9NSE7 274 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 PTCH2Q9Y6C5 1203 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 LOC102724428A0A0B4J2F2 783 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 THPOP40225 353 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 DPP6P42658 865 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 CLCN4P51793 760 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SIK1P57059 783 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 GSTM4Q03013 218 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ARL6IP1Q15041 203 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 UGCGQ16739 394 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 SLC22A10Q63ZE4 541 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 OR10R2Q8NGX6 335 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 UPRTQ96BW1 309 aa8.76□□□□□ -1.01
NIPBL-202ENST00000448238 ARSGQ96EG1 525 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms