RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 DSC3Q14574 896 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 HEPACAMQ14CZ8 416 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 NDUFA5Q16718 116 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 FAM46CQ5VWP2 391 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 OR52B6Q8NGF0 335 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 C1GALT1C1Q96EU7 318 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 CCDC3Q9BQI4 270 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 DCSTAMPQ9H295 470 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 PTGFRNQ9P2B2 879 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 SH3PXD2BA1X283 911 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 PI15O43692 258 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 SOCS5O75159 536 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 ADH1CP00326 375 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 CCNYL3P0C7X3 344 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 TNNI3P19429 210 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 TUBA1BP68363 451 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 CREB5Q02930 508 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 SYT16Q17RD7 645 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 TUBA1AQ71U36 451 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 TPT1P8Q9HAU6 139 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 POFUT2Q9Y2G5 429 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 PDE4DIPQ5VU43 2346 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 ATP1B2P14415 290 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 POU2F1P14859 743 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 TIE1P35590 1138 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 FEN1P39748 380 aaKnown RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 FBXO43Q4G163 708 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 OXR1Q8N573 874 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 YIPF2Q9BWQ6 316 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 C3orf14Q9HBI5 128 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 AMBNQ9NP70 447 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 JUNP05412 331 aaKnown RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 GRIA2P42262 883 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 MAGEA12P43365 314 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 SP140Q13342 867 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 KIAA1614Q5VZ46 1190 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 FAM131AQ6UXB0 335 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 GPR65Q8IYL9 337 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 LGI4Q8N135 537 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF461Q8TAF7 563 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 COL26A1Q96A83 441 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 RAD51AP1Q96B01 352 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 GOLGA4Q13439 2230 aaKnown RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 CITO14578 2027 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 TBX1O43435 398 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 HKDC1Q2TB90 917 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 GATAD2AQ86YP4 633 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 LSMEM2Q8N112 164 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 C1orf52Q8N6N3 182 aaKnown RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 LINC01465Q8N7H1 131 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 TFAP2CQ92754 450 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 HSH2DQ96JZ2 352 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 ITPAQ9BY32 194 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 SPRTNQ9H040 489 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 THUMPD1Q9NXG2 353 aaKnown RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF624Q9P2J8 865 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 GRXCR2A6NFK2 248 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF701M0R085 212 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-206ENST00000445265 BMP7P18075 431 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 GABRB3P28472 473 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 SCARB2Q14108 478 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 CAMKK1Q8N5S9 505 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 MFSD2AQ8NA29 543 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 C3orf58Q8NDZ4 430 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 TMEM125Q96AQ2 219 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 MCMBPQ9BTE3 642 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 CFL2Q9Y281 166 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
TCOF1-206ENST00000445265 COCHO43405 550 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 LDB2O43679 373 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 PRMT3O60678 531 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 TAS2R41P59536 307 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 RAB43Q86YS6 212 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 ANKHQ9HCJ1 492 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 ITM2CQ9NQX7 267 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 TSC22D2O75157 780 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 HPGDP15428 266 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 SEMA3BQ13214 749 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 ABRAXAS2Q15018 415 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 SNAPC1Q16533 368 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 IQCCQ4KMZ1 466 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 BRAT1Q6PJG6 821 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 GDPD4Q6W3E5 623 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 CRELD1Q96HD1 420 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 EBF1Q9UH73 591 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 A0A1W2PRB8 838 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 WNT9AO14904 365 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 INMTO95050 263 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 BCKDHAP12694 445 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 ADRA1AP35348 466 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 PIK3CBP42338 1070 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 CYP4F8P98187 520 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 TXNDC8Q6A555 127 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 NIPAL1Q6NVV3 410 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 TMPRSS11AQ6ZMR5 421 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF438Q7Z4V0 828 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 CENPSQ8N2Z9 138 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 BEND7Q8N7W2 519 aaPredicted RBP16.21■□□□□ 0.19
TCOF1-206ENST00000445265 OR13J1Q8NGT2 312 aa16.21■□□□□ 0.19
TCOF1-206ENST00000445265 CDC14AQ9UNH5 594 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms