RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 CTSFQ9UBX1 484 aa14.78□□□□□ -0.04
SEC13-213ENST00000445064 ZC3H7BQ9UGR2 993 aaKnown RBP14.78□□□□□ -0.04
SEC13-213ENST00000445064 GNPTGQ9UJJ9 305 aa14.78□□□□□ -0.04
SEC13-213ENST00000445064 TSR3Q9UJK0 312 aaKnown RBP14.78□□□□□ -0.04
SEC13-213ENST00000445064 PCDHGA10Q9Y5H3 936 aa14.78□□□□□ -0.04
SEC13-213ENST00000445064 HS3ST3B1Q9Y662 390 aa14.78□□□□□ -0.04
SEC13-213ENST00000445064 ANKRD12Q6UB98 2062 aa14.77□□□□□ -0.04
SEC13-213ENST00000445064 LOC105369274A0A096LPK9 316 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 LOC102723532A0A0G2JNH3 316 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 A0A0J9YVX5 310 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 HYKKA2RU49 373 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 FITM1A5D6W6 292 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 KPNA5O15131 536 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 NRP2O60462 931 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 SRPX2O60687 465 aaPredicted RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 MED26O95402 600 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 YBX1P67809 324 aaKnown RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 KCTD19Q17RG1 926 aaPredicted RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 AGAP7PQ5VUJ5 663 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 ZNF787Q6DD87 383 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 CNSTQ6PJW8 725 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 CES3Q6UWW8 571 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 OTOAQ7RTW8 1153 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 MAMDC2Q7Z304 686 aaPredicted RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 OR4N4Q8N0Y3 316 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 OR2A1Q8NGT9 310 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 DNAJB14Q8TBM8 379 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 AGAP4Q96P64 663 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 BARD1Q99728 777 aaKnown RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 WDR77Q9BQA1 342 aaPredicted RBP14.77□□□□□ -0.05
SEC13-213ENST00000445064 MESP1Q9BRJ9 268 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 RAB11FIP5Q9BXF6 653 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 SLC5A6Q9Y289 635 aa14.77□□□□□ -0.05
SEC13-213ENST00000445064 A0A1W2PPV9 198 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 VSTM2BA6NLU5 285 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 EIF2S1P05198 315 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 FMO4P31512 558 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 NPY2RP49146 381 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 BASP1P80723 227 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 Q0VFX4 171 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 FASTKQ14296 549 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 SIX1Q15475 284 aaPredicted RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 RBBP7Q16576 425 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 CCNG2Q16589 344 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 CTSL3PQ5NE16 218 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 IRAK1BP1Q5VVH5 260 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 IGFL2Q6UWQ7 119 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 KCNMB4Q86W47 210 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 PRSS58Q8IYP2 241 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 RAB42Q8N4Z0 105 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 OTUD6BQ8N6M0 293 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 OR2L3Q8NG85 312 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 OR11G2Q8NGC1 345 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 UBE2Q2Q8WVN8 375 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 THOC3Q96J01 351 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 C5orf34Q96MH7 638 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 IL22Q9GZX6 179 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 MRM3Q9HC36 420 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 ZNF304Q9HCX3 659 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 ENAMQ9NRM1 1142 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 AGPAT4Q9NRZ5 378 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 IL1RAPL1Q9NZN1 696 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 BFARQ9NZS9 450 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 NOVA2Q9UNW9 492 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 DRG1Q9Y295 367 aaKnown RBP14.76□□□□□ -0.05
SEC13-213ENST00000445064 NUP210LQ5VU65 1888 aa14.76□□□□□ -0.05
SEC13-213ENST00000445064 GOLGA8KD6RF30 607 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 GOLGA8TH3BQL2 631 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 VAPBO95292 243 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 FKBP9O95302 570 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 RPS3P23396 243 aaKnown RBP eCLIP14.75□□□□□ -0.05
SEC13-213ENST00000445064 MGAT1P26572 445 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 KCNJ1P48048 391 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 KLC1Q07866 573 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 RPS6KA1Q15418 735 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 MEI1Q5TIA1 1274 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 FBXO42Q6P3S6 717 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 HMGCLL1Q8TB92 370 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 STT3BQ8TCJ2 826 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 PPP4R1Q8TF05 950 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 FAM136AQ96C01 138 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 MFSD3Q96ES6 412 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 CNDP1Q96KN2 507 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 FOPNLQ96NB1 174 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 BIRC8Q96P09 236 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 ACAT2Q9BWD1 397 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 LHPPQ9H008 270 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 EIF2B3Q9NR50 452 aaKnown RBP14.75□□□□□ -0.05
SEC13-213ENST00000445064 SEMA3GQ9NS98 782 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 GALPQ9UBC7 116 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 NXT1Q9UKK6 140 aaKnown RBP14.75□□□□□ -0.05
SEC13-213ENST00000445064 MRFAP1Q9Y605 127 aa14.75□□□□□ -0.05
SEC13-213ENST00000445064 NIPSNAP2O75323 286 aa14.74□□□□□ -0.05
SEC13-213ENST00000445064 KLHL18O94889 574 aa14.74□□□□□ -0.05
SEC13-213ENST00000445064 ZGLP1P0C6A0 271 aa14.74□□□□□ -0.05
SEC13-213ENST00000445064 ARNTP27540 789 aa14.74□□□□□ -0.05
SEC13-213ENST00000445064 CCNFP41002 786 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms