RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 RFPL1O75677 317 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 ONECUT2O95948 504 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 ERVK-10P10266 1014 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 DCDP81605 110 aaKnown RBP18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 MPP1Q00013 466 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 CBLBQ13191 982 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 IL10RAQ13651 578 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 TCTN3Q6NUS6 607 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 CYHR1Q6ZMK1 362 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 ZNF655Q8N720 491 aaPredicted RBP18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 CD200R1Q8TD46 325 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 CERS2Q96G23 380 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 SNF8Q96H20 258 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 GPR21Q99679 349 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 TXLNGQ9NUQ3 528 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 TTI1O43156 1089 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 ZBTB14O43829 449 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 SLC28A2O43868 658 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 KLF7O75840 302 aaPredicted RBP18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 SEC31AO94979 1220 aaKnown RBP18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 FRG1Q14331 258 aaKnown RBP18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 GRM7Q14831 915 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 HIF1AQ16665 826 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 BBS9Q3SYG4 887 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 ATG14Q6ZNE5 492 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 IGDCC3Q8IVU1 814 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 IRAK4Q9NWZ3 460 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 TAS2R13Q9NYV9 303 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 ANKMY1Q9P2S6 941 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 ZC3H7BQ9UGR2 993 aaKnown RBP18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 TEX264Q9Y6I9 313 aa18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 SNRNP200O75643 2136 aaKnown RBP18.07■□□□□ 0.48
ATPAF2-201ENST00000444058 FITM1A5D6W6 292 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 KRT87PA6NCN2 255 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 TP73O15350 636 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 BANF1O75531 89 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 CTSBP07858 339 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 F7P08709 466 aaPredicted RBP18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 GABRB3P28472 473 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 CMPK1P30085 196 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 ELK3P41970 407 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 ITGA8P53708 1063 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 PNLIPRP1P54315 467 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 ARL4CP56559 192 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 RELAQ04206 551 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 CUL1Q13616 776 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 FASTKQ14296 549 aaKnown RBP18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 NKAIN1Q4KMZ8 207 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 LACTB2Q53H82 288 aaPredicted RBP18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 BBOF1Q8ND07 529 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 IP6K3Q96PC2 410 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 PKP4Q99569 1192 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 MIPEPQ99797 713 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 PLAC1Q9HBJ0 212 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 DHCR7Q9UBM7 475 aaKnown RBP18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 TRMT6Q9UJA5 497 aaKnown RBP18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 TSR3Q9UJK0 312 aaKnown RBP18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 ANAPC2Q9UJX6 822 aa18.06■□□□□ 0.48
ATPAF2-201ENST00000444058 A0A1B0GX78 115 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 OR2A25A4D2G3 310 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 E7ENX8 843 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 CTSVO60911 334 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 SLC16A8O95907 504 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 AHSGP02765 367 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 PSMB5P28074 263 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 RGS4P49798 205 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 TAP2Q03519 686 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 PRDX1Q06830 199 aaKnown RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 FAM214AQ32MH5 1076 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 STEAP4Q687X5 459 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 MRPL14Q6P1L8 145 aaKnown RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 RNF44Q7L0R7 432 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 PRICKLE2Q7Z3G6 844 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 CPNE9Q8IYJ1 553 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 ZNF480Q8WV37 535 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 NACC2Q96BF6 587 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 SELENOSQ9BQE4 189 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 TRIM51Q9BSJ1 452 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 UTP6Q9NYH9 597 aaKnown RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 IFT80Q9P2H3 777 aaPredicted RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 GPN3Q9UHW5 284 aaPredicted RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 TLK1Q9UKI8 766 aa18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 CORO1CQ9ULV4 474 aaPredicted RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 PCDHGA9Q9Y5G4 932 aaKnown RBP18.05■□□□□ 0.48
ATPAF2-201ENST00000444058 EFCAB8A8MWE9 144 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 E7ESA3 106 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 CCNDBP1O95273 360 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 PIM1P11309 404 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 RPA3P35244 121 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 CARSP49589 748 aaKnown RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 ABATP80404 500 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 NFKB2Q00653 900 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 TIAL1Q01085 375 aaKnown RBP eCLIP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 SSPNQ14714 243 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 TEDDM1Q5T9Z0 273 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 C1orf189Q5VU69 101 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 MED25Q71SY5 747 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 RAB43Q86YS6 212 aa18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 TMEM102Q8N9M5 508 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-201ENST00000444058 TTC29Q8NA56 475 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms