RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TIFABQ6ZNK6 161 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 TAOK1Q7L7X3 1001 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 TBC1D1Q86TI0 1168 aaPredicted RBP15.44■□□□□ 0.06
USP39-205ENST00000442708 KMT5CQ86Y97 462 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 MREGQ8N565 214 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 C19orf47Q8N9M1 422 aaKnown RBP15.44■□□□□ 0.06
USP39-205ENST00000442708 OR2L3Q8NG85 312 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 SLC22A18Q96BI1 424 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 FBXL8Q96CD0 374 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 RNF31Q96EP0 1072 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 CCDC77Q9BR77 488 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 ALG9Q9H6U8 611 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 SLC6A20Q9NP91 592 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 ABCF3Q9NUQ8 709 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 ZNF358Q9NW07 568 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 SLC39A1Q9NY26 324 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 FOXJ2Q9P0K8 574 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 AKAP7Q9P0M2 348 aaPredicted RBP15.44■□□□□ 0.06
USP39-205ENST00000442708 PSMC3IPQ9P2W1 217 aaPredicted RBP15.44■□□□□ 0.06
USP39-205ENST00000442708 TBK1Q9UHD2 729 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 TLK1Q9UKI8 766 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 SH2B3Q9UQQ2 575 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 BTRCQ9Y297 605 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 IGF2RP11717 2491 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 MAP1BP46821 2468 aaKnown RBP15.44■□□□□ 0.06
USP39-205ENST00000442708 WDFY3Q8IZQ1 3526 aa15.44■□□□□ 0.06
USP39-205ENST00000442708 SDK2Q58EX2 2172 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 IGKV1-8A0A0C4DH67 115 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 SMIM23A6NLE4 172 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 KLHL2O95198 593 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 NUDT17P0C025 328 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 HIST1H2AGP0C0S8 130 aaPredicted RBP15.43■□□□□ 0.06
USP39-205ENST00000442708 HIST1H2ADP20671 130 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 RPA3P35244 121 aaPredicted RBP15.43■□□□□ 0.06
USP39-205ENST00000442708 GRIA3P42263 894 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 GLRBP48167 497 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 GABRA4P48169 554 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 TBPL1P62380 186 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 NAE1Q13564 534 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 TGFBIQ15582 683 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 TAF1BQ53T94 588 aaPredicted RBP15.43■□□□□ 0.06
USP39-205ENST00000442708 UNQ6494/PRO21346Q6UXR6 183 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 CDHR3Q6ZTQ4 885 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 CLEC14AQ86T13 490 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 ADAMTSL2Q86TH1 951 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 OR56A3Q8NH54 315 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 PYCR2Q96C36 320 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 HIST1H2AHQ96KK5 128 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 OR6C1Q96RD1 312 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 ATOH8Q96SQ7 321 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 HIST1H2AJQ99878 128 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 H2AFJQ9BTM1 129 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 SGPP1Q9BX95 441 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 TRIM54Q9BYV2 358 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 NMRAL1Q9HBL8 299 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 FBXO8Q9NRD0 319 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 SOHLH2Q9NX45 425 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 TAC3Q9UHF0 121 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 PCDHB11Q9Y5F2 797 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 B3GALT1Q9Y5Z6 326 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 ASPMQ8IZT6 3477 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 DMXL2Q8TDJ6 3036 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 SPTBP11277 2137 aa15.43■□□□□ 0.06
USP39-205ENST00000442708 A0A1W2PPM1 405 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 NCF1BA6NI72 391 aaPredicted RBP15.42■□□□□ 0.06
USP39-205ENST00000442708 NCF1CA8MVU1 366 aaPredicted RBP15.42■□□□□ 0.06
USP39-205ENST00000442708 TUBBP07437 444 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 CTSBP07858 339 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 NCF1P14598 390 aaPredicted RBP15.42■□□□□ 0.06
USP39-205ENST00000442708 SLC5A2P31639 672 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 CDKL1Q00532 357 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 FOXM1Q08050 763 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 FIGLAQ6QHK4 219 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 TDRPQ86YL5 185 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 GPSM1Q86YR5 675 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 DNAJC22Q8N4W6 341 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 RHBDF1Q96CC6 855 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 MTBPQ96DY7 904 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 MED8Q96G25 268 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 OR4K3Q96R72 315 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 TAAR9Q96RI9 348 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 INTS7Q9NVH2 962 aaKnown RBP15.42■□□□□ 0.06
USP39-205ENST00000442708 RNF112Q9ULX5 631 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 ACACBO00763 2458 aa15.42■□□□□ 0.06
USP39-205ENST00000442708 ZNF839A8K0R7 811 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 UBXN8O00124 270 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 TAPBPO15533 448 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 TLX3O43711 291 aaPredicted RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 CTSVO60911 334 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 TIAF1O95411 115 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 MTHFD2P13995 350 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 RBMS1P29558 406 aaKnown RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 MLLT3P42568 568 aaPredicted RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 ARL4DP49703 201 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 PRDX1Q06830 199 aaKnown RBP15.41■□□□□ 0.06
USP39-205ENST00000442708 TUBB3Q13509 450 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 DEFB110Q30KQ9 67 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 TBC1D25Q3MII6 688 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 FBXO48Q5FWF7 155 aa15.41■□□□□ 0.06
USP39-205ENST00000442708 LGSNQ5TDP6 509 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms