RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KAT8Q9H7Z6 458 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CARS2Q9HA77 564 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 TM9SF3Q9HD45 589 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 EXOSC4Q9NPD3 245 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CCM2LQ9NUG4 571 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 C14orf105Q9NVL8 296 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PAK1IP1Q9NWT1 392 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 PGPEP1Q9NXJ5 209 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SPHK1Q9NYA1 384 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC23A1Q9UHI7 598 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CNOT6Q9ULM6 557 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 PDE10AQ9Y233 779 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NDUFAF1Q9Y375 327 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PCDHGB6Q9Y5F9 930 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 COPG1Q9Y678 874 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CDY1Q9Y6F8 540 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PIAS3Q9Y6X2 628 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GCN1Q92616 2671 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 KAT6AQ92794 2004 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FAM205AQ6ZU69 1335 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SPEF2Q9C093 1822 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TRBV23OR9-2A0A075B6M9 112 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 A0A1B0GWJ7 208 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LOC390937A0A1W2PQ73 354 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 AGAP5A6NIR3 686 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SDR42E2A6NKP2 422 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CDC7O00311 574 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CYB561D2O14569 222 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OIP5O43482 229 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NARSO43776 548 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 ERN1O75460 977 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 CLN5O75503 358 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RFPL3O75679 317 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 POP7O75817 140 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 BCAS2O75934 225 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 SRP72O76094 671 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 IL1BP01584 269 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 IFNA4P05014 189 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 IQCF3P0C7M6 154 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SMIM6P0DI80 62 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 THEGLP0DJG4 465 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ADORA3P0DMS8 318 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TCF4P15884 667 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CD36P16671 472 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 IL7RP16871 459 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LBPP18428 481 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RORAP35398 523 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 BRCC3P46736 316 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RPS9P46781 194 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 MASP1P48740 699 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SEC13P55735 322 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RAB4BP61018 213 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 IL5RAQ01344 420 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PIGFQ07326 219 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 AQP6Q13520 282 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC9A5Q14940 896 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HADHQ16836 314 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 RSPO4Q2I0M5 234 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 ATP13A4Q4VNC1 1196 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FASTKD1Q53R41 847 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 Q5BKY6 102 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HYIQ5T013 277 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM171A1Q5VUB5 890 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CENPPQ6IPU0 288 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ANKRD54Q6NXT1 300 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PNCKQ6P2M8 343 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EIF3MQ7L2H7 374 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 R3HCC1LQ7Z5L2 792 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 THAP5Q7Z6K1 395 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TFAP2DQ7Z6R9 452 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RASGRP3Q8IV61 690 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM178BQ8IXR5 827 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RCOR2Q8IZ40 523 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 DCP1BQ8IZD4 617 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF654Q8IZM8 581 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PGAM4Q8N0Y7 254 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MFSD4AQ8N468 514 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 KLHL36Q8N4N3 616 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ARFGAP1Q8N6T3 406 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 C10orf53Q8N6V4 93 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GDPD1Q8N9F7 314 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FBXO36Q8NEA4 188 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 C19orf18Q8NEA5 215 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 KBTBD8Q8NFY9 601 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OR1M1Q8NGA1 313 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OR52H1Q8NGJ2 320 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SETD7Q8WTS6 366 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 TFB1MQ8WVM0 346 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 GATAD2BQ8WXI9 593 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TOP1MTQ969P6 601 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PABPC5Q96DU9 382 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 MRPL48Q96GC5 212 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 NPAS2Q99743 824 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TREX2Q9BQ50 279 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF577Q9BSK1 485 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MS4A7Q9GZW8 240 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 TNKS2Q9H2K2 1166 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LRRC19Q9H756 370 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NIPAL2Q9H841 368 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LRRC4Q9HBW1 653 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms