RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HES3Q5TGS1 186 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 FAM45BPQ6NSW5 357 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 HSD11B1LQ7Z5J1 315 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PLPP6Q8IY26 295 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MAML2Q8IZL2 1156 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 FAM45AQ8TCE6 357 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PPP4R1Q8TF05 950 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PTCD2Q8WV60 388 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 DNASE2BQ8WZ79 361 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 GLYATL1Q969I3 302 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NXNL1Q96CM4 212 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 DGCR14Q96DF8 476 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 L3HYPDHQ96EM0 354 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 APOLD1Q96LR9 279 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 CDRT15Q96T59 188 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NDNQ99608 321 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MGME1Q9BQP7 344 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 C1QTNF2Q9BXJ5 285 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 SRMSQ9H3Y6 488 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 IARS2Q9NSE4 1012 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRMT6Q9UJA5 497 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 TLK1Q9UKI8 766 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MED16Q9Y2X0 877 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRSS38A1L453 326 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PIAS2O75928 621 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MT-CO3P00414 261 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRR35P0CG20 571 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 CDK4P11802 303 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 GPX3P22352 226 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATP4BP51164 291 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 LRRC36Q1X8D7 754 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 IL23RQ5VWK5 629 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 RETREG3Q86VR2 466 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NXPE2Q96DL1 559 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 DTD2Q96FN9 168 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 POM121Q96HA1 1249 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 SCYL1Q96KG9 808 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 TBATAQ96M53 351 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NSMCE3Q96MG7 304 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 FAM210AQ96ND0 272 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC29A1Q99808 456 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MRPS26Q9BYN8 205 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 GMPR2Q9P2T1 348 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF639Q9UID6 485 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 TCAF1Q9Y4C2 921 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 AP4B1Q9Y6B7 739 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZFC3H1O60293 1989 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 GOLGA8QA0A0J9YX86 632 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 GOLGA8OA6NCC3 632 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ASPDHA6ND91 283 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 GOLGA8NF8WBI6 632 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 K7ESM1 405 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ACOX3O15254 700 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 VPS26AO75436 327 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CDH2P19022 906 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CSRP1P21291 193 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CSNK1DP48730 415 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 SPINT3P49223 89 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 RAB10P61026 200 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CDK3Q00526 305 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRAP1Q12931 704 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CYLC2Q14093 348 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF648Q5T619 568 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 RBM44Q6ZP01 1051 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ERMP1Q7Z2K6 904 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TEX26Q8N6G2 289 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 WDR48Q8TAF3 677 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ANKRD49Q8WVL7 239 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 DLG3Q92796 817 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TGM7Q96PF1 710 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 DOK1Q99704 481 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 NUF2Q9BZD4 464 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 WDR41Q9HAD4 459 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CATSPERZQ9NTU4 200 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ARMC1Q9NVT9 282 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 GPN3Q9UHW5 284 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CRYL1Q9Y2S2 319 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 DTNAQ9Y4J8 743 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PLXNB3Q9ULL4 1909 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PCNX2A6NKB5 2137 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 NOTCH4Q99466 2003 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 E7ENX8 843 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLCO1B7G3V0H7 640 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PSMD11O00231 422 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 YY2O15391 372 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PHGDHO43175 533 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CRCPO75575 148 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 BAG2O95816 211 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 KLK3P07288 261 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF8P17098 575 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ALAS2P22557 587 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 FMO4P31512 558 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 MSX2P35548 267 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 RPL5P46777 297 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 NAGLUP54802 743 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 MAZP56270 477 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TAS2R39P59534 338 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 MRPS22P82650 360 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 RHDQ02161 417 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRIP10Q15642 601 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms