RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SEMA3DO95025 777 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 RPLP0P05388 317 aaKnown RBP19.77■□□□□ 0.76
SHOX2-203ENST00000441443 SLC15A1P46059 708 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 IL2P60568 153 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 DDR2Q16832 855 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 INPP5KQ9BT40 448 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 NXF2Q9GZY0 626 aaKnown RBP19.77■□□□□ 0.76
SHOX2-203ENST00000441443 TAS2R9Q9NYW1 312 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 ERVW-1Q9UQF0 538 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 LOC110117498-PIK3R3F6TDL0 507 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 H3BQ06 376 aaPredicted RBP19.76■□□□□ 0.75
SHOX2-203ENST00000441443 HORMAD1Q86X24 394 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 OR10T2Q8NGX3 314 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 IPPKQ9H8X2 491 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 NMUR1Q9HB89 426 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 TBC1D24Q9ULP9 559 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 VPS4AQ9UN37 437 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 BTBD3Q9Y2F9 522 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 ANGPTL3Q9Y5C1 460 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 ACTL7AQ9Y615 435 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 MAU2Q9Y6X3 613 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 NUP214P35658 2090 aaPredicted RBP19.76■□□□□ 0.75
SHOX2-203ENST00000441443 TFECO14948 347 aaPredicted RBP19.76■□□□□ 0.75
SHOX2-203ENST00000441443 GUCA1CO95843 209 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 VLDLRP98155 873 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 CRHR2Q13324 411 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 UPP1Q16831 310 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 TBRG1Q3YBR2 411 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 SUSD1Q6UWL2 747 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 SLC46A3Q7Z3Q1 461 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 METTL23Q86XA0 190 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 PIANPQ8IYJ0 282 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 TMEM86AQ8N2M4 240 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 TSPAN18Q96SJ8 248 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 RTP3Q9BQQ7 232 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 RAPGEFL1Q9UHV5 662 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 CARD8Q9Y2G2 431 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 FAM220BPB1ANY3 271 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 VPS26AO75436 327 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 NPRL3Q12980 569 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 SLC14A1Q13336 389 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 GTF2H2Q13888 395 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 GTF2H2CQ6P1K8 395 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 LYPD8Q6UX82 237 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 REM2Q8IYK8 340 aaPredicted RBP19.76■□□□□ 0.75
SHOX2-203ENST00000441443 UMODL1-AS1Q8N2C9 162 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 GABARAPL1Q9H0R8 117 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 ABCC13Q9NSE7 274 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 PEX16Q9Y5Y5 336 aa19.76■□□□□ 0.75
SHOX2-203ENST00000441443 ODC1P11926 461 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 MAGEA2P43356 314 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 PSAPL1Q6NUJ1 521 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 CYP4Z2PQ8N1L4 340 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 KBTBD8Q8NFY9 601 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 PPP3R2Q96LZ3 170 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 IRF2BPLQ9H1B7 796 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 TM9SF3Q9HD45 589 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 GABRQQ9UN88 632 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 CCL27Q9Y4X3 112 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 EVPLLA8MZ36 301 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 FGF1P05230 155 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 DNAJA1P31689 397 aaKnown RBP19.75■□□□□ 0.75
SHOX2-203ENST00000441443 KRT6CP48668 564 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 GZMMP51124 257 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 GNG2P59768 71 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 Q5BKY6 102 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 ATG9BQ674R7 924 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 OVOS1Q6IE37 1185 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 NEK5Q6P3R8 708 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 ZNF551Q7Z340 670 aaPredicted RBP19.75■□□□□ 0.75
SHOX2-203ENST00000441443 CALHM3Q86XJ0 350 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 ZNF675Q8TD23 568 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 CD200R1Q8TD46 325 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 GPR152Q8TDT2 470 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 MTFMTQ96DP5 389 aaKnown RBP19.75■□□□□ 0.75
SHOX2-203ENST00000441443 KCNC2Q96PR1 638 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 BEX2Q9BXY8 128 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 TNKS2Q9H2K2 1166 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 IL1RAPQ9NPH3 570 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 MKLN1Q9UL63 735 aa19.75■□□□□ 0.75
SHOX2-203ENST00000441443 KRT87PA6NCN2 255 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 DUSP11O75319 330 aaKnown RBP19.74■□□□□ 0.75
SHOX2-203ENST00000441443 IL6P05231 212 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 PKMP14618 531 aaKnown RBP19.74■□□□□ 0.75
SHOX2-203ENST00000441443 HTR7P34969 479 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 CDKN2CP42773 168 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 GDF5P43026 501 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 HSPA7P48741 367 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 C17orf99Q6UX52 265 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ZNF517Q6ZMY9 492 aaPredicted RBP19.74■□□□□ 0.75
SHOX2-203ENST00000441443 SCD5Q86SK9 330 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 CADM2Q8N3J6 435 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 CEP19Q96LK0 163 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 CPPED1Q9BRF8 314 aaPredicted RBP19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ABI2Q9NYB9 513 aaPredicted RBP19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ZNF451Q9Y4E5 1061 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 LYVE1Q9Y5Y7 322 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 TRBV5-3A0A0A0MS03 114 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 GPR39O43194 453 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms