RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 VPS11Q9H270 941 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 CCDC177Q9NQR7 707 aaPredicted RBP16.3■□□□□ 0.2
TARDBP-203ENST00000439080 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 SLC39A1Q9NY26 324 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 TBK1Q9UHD2 729 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 TAC3Q9UHF0 121 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 PCDHB11Q9Y5F2 797 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 ZFHX4Q86UP3 3567 aa16.3■□□□□ 0.2
TARDBP-203ENST00000439080 SMIM23A6NLE4 172 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 CDRT15L2A8MXV6 281 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 NUDT17P0C025 328 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 TFEBP19484 476 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 RAB15P59190 212 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 MC2RQ01718 297 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 FOXM1Q08050 763 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 TUBB3Q13509 450 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 KIAA1614Q5VZ46 1190 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 MREGQ8N565 214 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 OR2W6PQ8NHA6 318 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 USP7Q93009 1102 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 EXT2Q93063 718 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 KIAA1191Q96A73 305 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 FBXL8Q96CD0 374 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 NXNL1Q96CM4 212 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 CTRCQ99895 268 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 EGFL8Q99944 293 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 ATG10Q9H0Y0 220 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 CCDC86Q9H6F5 360 aaKnown RBP16.29■□□□□ 0.2
TARDBP-203ENST00000439080 ALG9Q9H6U8 611 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 PPCSQ9HAB8 311 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 NMRAL1Q9HBL8 299 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 APMAPQ9HDC9 416 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 PDE7BQ9NP56 450 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 THSD1Q9NS62 852 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 KLHL20Q9Y2M5 609 aa16.29■□□□□ 0.2
TARDBP-203ENST00000439080 NCF1BA6NI72 391 aaPredicted RBP16.28■□□□□ 0.2
TARDBP-203ENST00000439080 NCF1CA8MVU1 366 aaPredicted RBP16.28■□□□□ 0.2
TARDBP-203ENST00000439080 C9orf172C9J069 976 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 KLHL2O95198 593 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 FKBP9O95302 570 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 NCF1P14598 390 aaPredicted RBP16.28■□□□□ 0.2
TARDBP-203ENST00000439080 FOLR1P15328 257 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 GLRBP48167 497 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 CDKL1Q00532 357 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 TGFBIQ15582 683 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 ZIC1Q15915 447 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 FAM83EQ2M2I3 478 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 TBC1D25Q3MII6 688 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 PRAMEF13Q5VWM6 474 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 ICE2Q659A1 982 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 CLEC14AQ86T13 490 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 ATL1Q8WXF7 558 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 TAAR9Q96RI9 348 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 DDA1Q9BW61 102 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 SLC6A20Q9NP91 592 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 FBXO8Q9NRD0 319 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 PCMTD2Q9NV79 361 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 INTS7Q9NVH2 962 aaKnown RBP16.28■□□□□ 0.2
TARDBP-203ENST00000439080 FOXJ2Q9P0K8 574 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 RNF112Q9ULX5 631 aa16.28■□□□□ 0.2
TARDBP-203ENST00000439080 MDC1Q14676 2089 aaKnown RBP16.28■□□□□ 0.2
TARDBP-203ENST00000439080 POLR1CO15160 346 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 MAP3K7O43318 606 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 KERAO60938 352 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 RFPL1O75677 317 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 CCNDBP1O95273 360 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ANXA5P08758 320 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 CMPK1P30085 196 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ERVPABLB-1P60509 514 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 YBX1P67809 324 aaKnown RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ACY1Q03154 408 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 NAE1Q13564 534 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 GPR19Q15760 415 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ZXDCQ2QGD7 858 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 DEFB110Q30KQ9 67 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 DCAF12Q5T6F0 453 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 TMEM164Q5U3C3 297 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 CYB5D1Q6P9G0 228 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 CEACAM20Q6UY09 585 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 CDHR3Q6ZTQ4 885 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ISCA2Q86U28 154 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 TDRPQ86YL5 185 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 GPSM1Q86YR5 675 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 PLD6Q8N2A8 252 aaKnown RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 MZB1Q8WU39 189 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ALKBH8Q96BT7 664 aaKnown RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 PYCR2Q96C36 320 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 TCTN2Q96GX1 697 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 ZNF578Q96N58 590 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 SGPP1Q9BX95 441 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 FANCEQ9HB96 536 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 FAM60AQ9NP50 221 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 MRPS30Q9NP92 439 aaKnown RBP16.27■□□□□ 0.2
TARDBP-203ENST00000439080 EURLQ9NYK6 297 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 DKK4Q9UBT3 224 aa16.27■□□□□ 0.2
TARDBP-203ENST00000439080 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms