RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 PRAMEF4O60810 478 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 JUPP14923 745 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 EPHA3P29320 983 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 HMOX2P30519 316 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 SHMT2P34897 504 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 HOXD12P35452 270 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ARL1P40616 181 aaPredicted RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 DPP6P42658 865 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 DHPSP49366 369 aaPredicted RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 UBE2IP63279 158 aaKnown RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 IFT88Q13099 833 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 CHIT1Q13231 466 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 KRT33BQ14525 404 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 LSM12Q3MHD2 195 aaKnown RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 PRAMEF14Q5SWL7 426 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 PRAMEF9Q5VWM5 478 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 PRAMEF13Q5VWM6 474 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 GRHL2Q6ISB3 625 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 LARP4Q71RC2 724 aaKnown RBP eCLIP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 MTDHQ86UE4 582 aaKnown RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ALYREFQ86V81 257 aaKnown RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 GKN2Q86XP6 184 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 NAGSQ8N159 534 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 SFRP1Q8N474 314 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 DCBLD1Q8N8Z6 715 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 LINC01555Q8NAE3 123 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 AVL9Q8NBF6 648 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ZBTB44Q8NCP5 570 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 USP7Q93009 1102 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 NEIL2Q969S2 332 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 PTCD3Q96EY7 689 aaKnown RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 IL17FQ96PD4 163 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 OR52B2Q96RD2 323 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 WDR55Q9H6Y2 383 aaPredicted RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 SLC40A1Q9NP59 571 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ABCF3Q9NUQ8 709 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 MRGBPQ9NV56 204 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ZSCAN32Q9NX65 697 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 PLAGL1Q9UM63 463 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 TRIM33Q9UPN9 1127 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ICKQ9UPZ9 632 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 RNF11Q9Y3C5 154 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 DYRK1BQ9Y463 629 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 ADAMTS9Q9P2N4 1935 aa14.6□□□□□ -0.07
TMEM40-204ENST00000435218 MDC1Q14676 2089 aaKnown RBP14.6□□□□□ -0.07
TMEM40-204ENST00000435218 A0A1W2PPV9 198 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 E7EQ34 232 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 H0YIV9 168 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 GPR37L1O60883 481 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 CELA2BP08218 269 aaPredicted RBP14.59□□□□□ -0.07
TMEM40-204ENST00000435218 PRR35P0CG20 571 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 AVPR2P30518 371 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 CTSKP43235 329 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 IRF8Q02556 426 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 SRSF5Q13243 272 aaKnown RBP14.59□□□□□ -0.07
TMEM40-204ENST00000435218 C10orf62Q5T681 223 aaPredicted RBP14.59□□□□□ -0.07
TMEM40-204ENST00000435218 ATG9BQ674R7 924 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 SUSD1Q6UWL2 747 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 SLCO4C1Q6ZQN7 724 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 CLNKQ7Z7G1 428 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 RBM12BQ8IXT5 1001 aaKnown RBP14.59□□□□□ -0.07
TMEM40-204ENST00000435218 C3orf30Q96M34 536 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 EFCAB11Q9BUY7 163 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 NMUR2Q9GZQ4 415 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 OR6C2Q9NZP2 312 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 ZFP69BQ9UJL9 534 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 SNX6Q9UNH7 406 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 PCDH15Q96QU1 1955 aa14.59□□□□□ -0.07
TMEM40-204ENST00000435218 LAMA1P25391 3075 aa14.58□□□□□ -0.07
TMEM40-204ENST00000435218 GOLGA8QA0A0J9YX86 632 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 GOLGA8OA6NCC3 632 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 LMO7DNF2Z398 122 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 GOLGA8NF8WBI6 632 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 FCHO1O14526 889 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 PRICKLE3O43900 615 aaPredicted RBP14.58□□□□□ -0.08
TMEM40-204ENST00000435218 ULK1O75385 1050 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 KRT6AP02538 564 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 KRT6BP04259 564 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 KRT6CP48668 564 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 IRX1P78414 480 aaPredicted RBP14.58□□□□□ -0.08
TMEM40-204ENST00000435218 DOC2AQ14183 400 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 XKR6Q5GH73 641 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 OGFOD2Q6N063 350 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 CHSY3Q70JA7 882 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 ZNF771Q7L3S4 317 aaPredicted RBP14.58□□□□□ -0.08
TMEM40-204ENST00000435218 TRIM46Q7Z4K8 759 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 DDIASQ8IXT1 998 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 ZNF548Q8NEK5 533 aaPredicted RBP14.58□□□□□ -0.08
TMEM40-204ENST00000435218 SLC5A11Q8WWX8 675 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 ERP27Q96DN0 273 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 ZNF385DQ9H6B1 395 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 CPNE7Q9UBL6 633 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 TSC22D4Q9Y3Q8 395 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 SDK1Q7Z5N4 2213 aa14.58□□□□□ -0.08
TMEM40-204ENST00000435218 A0A1B0GVT2 93 aa14.57□□□□□ -0.08
TMEM40-204ENST00000435218 FAM221BA6H8Z2 402 aa14.57□□□□□ -0.08
TMEM40-204ENST00000435218 NPIPB8E9PQR5 432 aa14.57□□□□□ -0.08
TMEM40-204ENST00000435218 MANBAO00462 879 aa14.57□□□□□ -0.08
TMEM40-204ENST00000435218 AQP9O43315 295 aa14.57□□□□□ -0.08
TMEM40-204ENST00000435218 PIAS2O75928 621 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms