RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ATP8B4Q8TF62 1192 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 TOMM40LQ969M1 308 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 C7orf26Q96N11 449 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 OVOL2Q9BRP0 275 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 TDRD1Q9BXT4 1180 aaKnown RBP2.86□□□□□ -1.95
PTPN4-205ENST00000433888 ITPAQ9BY32 194 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 FTOQ9C0B1 505 aaKnown RBP eCLIP2.86□□□□□ -1.95
PTPN4-205ENST00000433888 KCNK15Q9H427 330 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 SERINC1Q9NRX5 453 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 ANKEF1Q9NU02 776 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 HAUS2Q9NVX0 235 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 ADD3Q9UEY8 706 aaKnown RBP2.86□□□□□ -1.95
PTPN4-205ENST00000433888 TSPAN16Q9UKR8 245 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 PCDHGB4Q9UN71 923 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 TRIM17Q9Y577 477 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 NME7Q9Y5B8 376 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 TDRD9Q8NDG6 1382 aaKnown RBP2.86□□□□□ -1.95
PTPN4-205ENST00000433888 A0A087WUV0 522 aaPredicted RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 FEZF1A0PJY2 475 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 LNP1A1A4G5 178 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 C2orf81A6NN90 581 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 A8MXK9 166 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 AP3D1O14617 1153 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 GPRIN2O60269 458 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 TRUB2O95900 331 aaKnown RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 AKR1B1P15121 316 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 PPARGP37231 505 aaPredicted RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 RAD52P43351 418 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 TSFMP43897 325 aaKnown RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 RPL21P46778 160 aaKnown RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 KRT33BQ14525 404 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 ZNF74Q16587 644 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 SNX30Q5VWJ9 437 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 CES4AQ5XG92 561 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 FAM166AQ6J272 317 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 TMEM154Q6P9G4 183 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 CHST9Q7L1S5 443 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 CEACAM19Q7Z692 300 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 LDB1Q86U70 411 aaPredicted RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 ZFAND4Q86XD8 727 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 CFAP206Q8IYR0 622 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 FGFRL1Q8N441 504 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 OR13C3Q8NGS6 347 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 FAM218AQ96MZ4 157 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 NEK1Q96PY6 1258 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 NUDT16L1Q9BRJ7 211 aaKnown RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 URM1Q9BTM9 101 aaKnown RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 GHITMQ9H3K2 345 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 TUBB1Q9H4B7 451 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 HEXA-AS1Q9H8Q6 139 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 PPANQ9NQ55 473 aaKnown RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 MRGBPQ9NV56 204 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 THAP10Q9P2Z0 257 aaPredicted RBP2.85□□□□□ -1.95
PTPN4-205ENST00000433888 HACL1Q9UJ83 578 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 GRIP1Q9Y3R0 1128 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 WIPI2Q9Y4P8 454 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 ITIH6Q6UXX5 1313 aa2.85□□□□□ -1.95
PTPN4-205ENST00000433888 A0A087X0M5 115 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 A0A1B0GX30 115 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 ANKRD18BA2A2Z9 1011 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 PI4KAP2A4QPH2 592 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 SHISA9B4DS77 424 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 EPHB6O15197 1021 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 ZBED4O75132 1171 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 CEACAM4O75871 244 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 RB1P06400 928 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 HSP90AA1P07900 732 aaKnown RBP2.84□□□□□ -1.95
PTPN4-205ENST00000433888 CDH3P22223 829 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 TM4SF1P30408 202 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 GABRA5P31644 462 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 ACSL1P33121 698 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 HADHAP40939 763 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 XGP55808 180 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 PSMC6P62333 389 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 SETQ01105 290 aaPredicted RBP2.84□□□□□ -1.95
PTPN4-205ENST00000433888 ZNF415Q09FC8 603 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 PRKG2Q13237 762 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 CRYMQ14894 314 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 LCN1P1Q5VSP4 162 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 UGT3A1Q6NUS8 523 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 TMCO3Q6UWJ1 677 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 TMPRSS11FQ6ZWK6 438 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 RAPH1Q70E73 1250 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 IKBIPQ70UQ0 350 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 G2E3Q7L622 706 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 NUDT13Q86X67 352 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 PHC2Q8IXK0 858 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 METTL4Q8N3J2 472 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 CCDC107Q8WV48 283 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 USP6NLQ92738 828 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 DHX58Q96C10 678 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 ATXN7L3BQ96GX2 97 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 NKX3-1Q99801 234 aaPredicted RBP2.84□□□□□ -1.95
PTPN4-205ENST00000433888 FNDC11Q9BVV2 318 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 MXD3Q9BW11 206 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 PARLQ9H300 379 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 SEPT11Q9NVA2 429 aaKnown RBP2.84□□□□□ -1.95
PTPN4-205ENST00000433888 STUB1Q9UNE7 303 aa2.84□□□□□ -1.95
PTPN4-205ENST00000433888 KIF25-AS1Q9Y6Z4 181 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms