RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TACR1P25103 407 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 SGCGQ13326 291 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 FAM174BQ3ZCQ3 159 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 USP39Q53GS9 565 aaKnown RBP16.16■□□□□ 0.18
USHBP1-203ENST00000431146 LIPJQ5W064 366 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 TEX101Q9BY14 249 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 DPEP2Q9H4A9 486 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 PRM3Q9NNZ6 103 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 CD207Q9UJ71 328 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 TDRKHQ9Y2W6 561 aaKnown RBP16.16■□□□□ 0.18
USHBP1-203ENST00000431146 PCM1Q15154 2024 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 COL4A2P08572 1712 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3DA0A087WVF3 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3IA0A087WXS9 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3EA0A087X179 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3KA0A087X1G2 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3FA6NER0 549 aaPredicted RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3LB9A6J9 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 SCAMP1O15126 338 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 PLRG1O43660 514 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3HP0C7X1 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 MAPK9P45984 424 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 ADPRHP54922 357 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 SF1Q15637 639 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 CATSPEREQ5SY80 951 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3GQ6DHY5 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3CQ6IPX1 549 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 CHST15Q7LFX5 561 aaPredicted RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TMPRSS11BQ86T26 416 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 IFNEQ86WN2 208 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TBC1D3Q8IZP1 549 aaPredicted RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 OR9A1PQ8NGU1 263 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TMEM125Q96AQ2 219 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 RSRC1Q96IZ7 334 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 APOLD1Q96LR9 279 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TSSK3Q96PN8 268 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 PIF1Q9H611 641 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 KCNK12Q9HB15 430 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 MRPL40Q9NQ50 206 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 PCDHA9Q9Y5H5 950 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 RNGTTO60942 597 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 ASGR2P07307 311 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 CD72P21854 359 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 PEX2P28328 305 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 RPS21P63220 83 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 TMEM31Q5JXX7 168 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 SPANXN4Q5MJ08 99 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 PRMT9Q6P2P2 845 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 WDR20Q8TBZ3 569 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 GFM2Q969S9 779 aaKnown RBP16.15■□□□□ 0.18
USHBP1-203ENST00000431146 EGLN2Q96KS0 407 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 PPM1MQ96MI6 270 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 EBPLQ9BY08 206 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 SLC17A9Q9BYT1 436 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 SGK2Q9HBY8 427 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 USP22Q9UPT9 525 aa16.15■□□□□ 0.18
USHBP1-203ENST00000431146 SLC31A1O15431 190 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 LRATO95237 230 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 PCNAP12004 261 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 NPPBP16860 134 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 TRIM23P36406 574 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 PPP2CBP62714 309 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 PPP2CAP67775 309 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 SMU1Q2TAY7 513 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 NANOGP8Q6NSW7 305 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 PDZD3Q86UT5 571 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 FBXO15Q8NCQ5 510 aaPredicted RBP16.14■□□□□ 0.17
USHBP1-203ENST00000431146 NAF1Q96HR8 494 aaKnown RBP16.14■□□□□ 0.17
USHBP1-203ENST00000431146 ZBTB18Q99592 522 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 COPS7BQ9H9Q2 264 aaPredicted RBP16.14■□□□□ 0.17
USHBP1-203ENST00000431146 NANOGQ9H9S0 305 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 BCAP29Q9UHQ4 241 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 MOSPD1Q9UJG1 213 aa16.14■□□□□ 0.17
USHBP1-203ENST00000431146 UGDHO60701 494 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 ACP5P13686 325 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 AMD1P17707 334 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 ATP6V1B2P21281 511 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 PAX7P23759 505 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 IGFALSP35858 605 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 MEF2AQ02078 507 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 TAP2Q03519 686 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 GRSF1Q12849 480 aaKnown RBP eCLIP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 AGERQ15109 404 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 TRIP10Q15642 601 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 TMEM259Q4ZIN3 620 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 GRHL2Q6ISB3 625 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 CAPN13Q6MZZ7 669 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 DUS1LQ6P1R4 473 aaKnown RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 IZUMO2Q6UXV1 221 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 DLEU7Q6UYE1 221 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 KLHDC8AQ8IYD2 350 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 SLC44A3Q8N4M1 653 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 TFGQ92734 400 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 CMTM7Q96FZ5 175 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 KCNE2Q9Y6J6 123 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 NUP214P35658 2090 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 MAGEB17A8MXT2 336 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 NARSO43776 548 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms