RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 LIPIQ6XZB0 460 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 GPR180Q86V85 440 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 PROSER1Q86XN7 944 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 S100A13Q99584 98 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 HDAC8Q9BY41 377 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 C3orf14Q9HBI5 128 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SEMA3GQ9NS98 782 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SPO11Q9Y5K1 396 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SMIM31A0A1B0GVY4 71 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 IDH3BO43837 385 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 PRKCHP24723 683 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 CD38P28907 300 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SLC26A3P40879 764 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ASMTP46597 345 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 CLDN2P57739 230 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 C1DQ13901 141 aaKnown RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 RNASE12Q5GAN4 147 aaKnown RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 DPY19L2P1Q6NXN4 242 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 RHBDD1Q8TEB9 315 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 PYCR2Q96C36 320 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 DTD2Q96FN9 168 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 CORO2BQ9UQ03 480 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 DHRS7Q9Y394 339 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 WASHC2DQ5SRD0 308 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 CPTPQ5TA50 214 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 CXorf57Q6NSI4 855 aaKnown RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 IGDCC3Q8IVU1 814 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 OR4A15Q8NGL6 344 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 MYLK2Q9H1R3 596 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SERTAD3Q9UJW9 196 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 DGKBQ9Y6T7 804 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ATP6AP2A0A1C7CYW4 349 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SLC16A5O15375 505 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ATP6AP2O75787 350 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ANXA4P09525 319 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 UQCRBP14927 111 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 STK32CQ86UX6 486 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 EID3Q8N140 333 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ARRDC3Q96B67 414 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ZNF707Q96C28 371 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ANKRD27Q96NW4 1050 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ADGRE2Q9UHX3 823 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 C15orf38-AP3S2A0A0A6YYH1 394 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 CDC7O00311 574 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 NPHS1O60500 1241 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 HERVK_113P63132 956 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 FAM98BQ52LJ0 330 aaKnown RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 PNCKQ6P2M8 343 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 ARPINQ7Z6K5 226 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 WBP2Q969T9 261 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 ERVK-6Q9BXR3 956 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 MRTO4Q9UKD2 239 aaKnown RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 FANCGO15287 622 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 IGLV3-27P01718 113 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 DMPKQ09013 629 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 KCTD21Q4G0X4 260 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 AGTRAPQ6RW13 159 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 WFDC5Q8TCV5 224 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 CDH22Q9UJ99 828 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 RBBP6Q7Z6E9 1792 aaKnown RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 TSPAN19P0C672 248 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 MANFP55145 182 aaKnown RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 MAPKAPK3Q16644 382 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 FAAH2Q6GMR7 532 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 Q6ZNB5 142 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 ZBTB46Q86UZ6 589 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 MAGEA13PA6NCF6 341 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 KLK3P07288 261 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 ITGA3P26006 1051 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 EPHA3P29320 983 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 RGRP47804 291 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 BANPQ8N9N5 519 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF671Q8TAW3 534 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 TP53INP1Q96A56 240 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 BRINP2Q9C0B6 783 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 LEF1Q9UJU2 399 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 EVPLQ92817 2033 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 PLA2G16P53816 162 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 ZIK1Q3SY52 487 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-207ENST00000429896 SCAIQ8N9R8 606 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 FTSJ1Q9UET6 329 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 PPM1HQ9ULR3 514 aa12.58□□□□□ -0.4
PTCH1-207ENST00000429896 OR6C74A6NCV1 312 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 CPN2P22792 545 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 LSM3P62310 102 aaKnown RBP12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ARMC4Q5T2S8 1044 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ADHFE1Q8IWW8 467 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 MDGA1Q8NFP4 955 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ITCHQ96J02 903 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms