RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 FAM3CQ92520 227 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 CCDC124Q96CT7 223 aaKnown RBP18.4■□□□□ 0.54
HDAC10-204ENST00000429374 HBEGFQ99075 208 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 EFCAB11Q9BUY7 163 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 SPATA6Q9NWH7 488 aaPredicted RBP18.4■□□□□ 0.54
HDAC10-204ENST00000429374 SPATA7Q9P0W8 599 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 ASF1AQ9Y294 204 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 DYRK1BQ9Y463 629 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 PCYT1BQ9Y5K3 369 aaPredicted RBP18.4■□□□□ 0.54
HDAC10-204ENST00000429374 NUMA1Q14980 2115 aa18.4■□□□□ 0.54
HDAC10-204ENST00000429374 F5P12259 2224 aa18.39■□□□□ 0.54
HDAC10-204ENST00000429374 PRR19A6NJB7 356 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 E7EQ34 232 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 MAN2B1O00754 1011 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 IL6P05231 212 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 CEACAM5P06731 702 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 SRFP11831 508 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 HSD17B1P14061 328 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 VARSP26640 1264 aaKnown RBP18.39■□□□□ 0.53
HDAC10-204ENST00000429374 KIAA1024LP59773 190 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 SGO1Q5FBB7 561 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 LCTLQ6UWM7 567 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 TBC1D21Q8IYX1 336 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 DNAJB8Q8NHS0 232 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 RPLP0P6Q8NHW5 317 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 HAUS8Q9BT25 410 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 DPY30Q9C005 99 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 OR1A2Q9Y585 309 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 DOCK9Q9BZ29 2069 aa18.39■□□□□ 0.53
HDAC10-204ENST00000429374 SHISA7A6NL88 538 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 FXYD1O00168 92 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CACNB4O00305 520 aaPredicted RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SORBS2O94875 1100 aaKnown RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 ANPEPP15144 967 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 XRCC1P18887 633 aaPredicted RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CD22P20273 847 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 PTDSS1P48651 473 aaKnown RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CLNS1AP54105 237 aaKnown RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CLDN8P56748 225 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 TBPL1P62380 186 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 FLOT2Q14254 428 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SLC44A4Q53GD3 710 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 PAGE2BQ5JRK9 111 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 OR2T34Q8NGX1 318 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 BTBD1Q9H0C5 482 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 PCBD2Q9H0N5 130 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SLC6A17Q9H1V8 727 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SGK2Q9HBY8 427 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CCDC177Q9NQR7 707 aaPredicted RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 MAPRE3Q9UPY8 281 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 KRT87PA6NCN2 255 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 ASPDHA6ND91 283 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 C10orf142B7Z368 130 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 TOR1BO14657 336 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 PRMT3O60678 531 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SLC35G4P0C7Q5 338 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 C1GALT1C1LP0DN25 315 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 BCKDHAP12694 445 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 AMD1P17707 334 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 VHLP40337 213 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SMAD2Q15796 467 aaKnown RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CYP2A13Q16696 494 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 PLA2G4EQ3MJ16 856 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 TMEM92Q6UXU6 159 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 LIX1Q8N485 282 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 SLC26A7Q8TE54 656 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 MTFMTQ96DP5 389 aaKnown RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 OSBPL6Q9BZF3 934 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 TRIT1Q9H3H1 467 aaKnown RBP18.38■□□□□ 0.53
HDAC10-204ENST00000429374 MUC13Q9H3R2 512 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 CLMPQ9H6B4 373 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 VPS29Q9UBQ0 182 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 PPT2Q9UMR5 302 aa18.38■□□□□ 0.53
HDAC10-204ENST00000429374 KANSL1LA0AUZ9 987 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 LRRC72A6NJI9 287 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 FOXE1O00358 373 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-204ENST00000429374 IGLV3-19P01714 112 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 NDUFV2P19404 249 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 SLC6A2P23975 617 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 HNRNPFP52597 415 aaKnown RBP18.37■□□□□ 0.53
HDAC10-204ENST00000429374 MS4A2Q01362 244 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 BNIP2Q12982 314 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 TDGQ13569 410 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 NFYCQ13952 458 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 HIST2H2ACQ16777 129 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-204ENST00000429374 PYCR3Q53H96 274 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 HIST2H2AA3Q6FI13 130 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 MED27Q6P2C8 311 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 LAS2Q8IYD9 372 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 SYNPOQ8N3V7 929 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 EFCAB3Q8N7B9 438 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 KLK6Q92876 244 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 NEIL2Q969S2 332 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 UBE2E3Q969T4 207 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 NMRK1Q9NWW6 199 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 SIRT5Q9NXA8 310 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 RUVBL1Q9Y265 456 aaKnown RBP18.37■□□□□ 0.53
HDAC10-204ENST00000429374 PRKAB1Q9Y478 270 aa18.37■□□□□ 0.53
HDAC10-204ENST00000429374 PCDHA9Q9Y5H5 950 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms