RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 NMUR2Q9GZQ4 415 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 MEAF6Q9HAF1 191 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 WASH6PQ9NQA3 447 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CUEDC1Q9NWM3 386 aaPredicted RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 UCKL1Q9NWZ5 548 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 SPHK1Q9NYA1 384 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 SPATA7Q9P0W8 599 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ARMCX1Q9P291 453 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 TRPS1Q9UHF7 1281 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 SNX11Q9Y5W9 270 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 UNC13CQ8NB66 2214 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 NUP214P35658 2090 aaPredicted RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 CCT8L1PA6NM43 557 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 PATE3B3GLJ2 98 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 B4DGG1 531 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 FCHO1O14526 889 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 PRICKLE3O43900 615 aaPredicted RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 UBOX5O94941 541 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 OTCP00480 354 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 SP9P0CG40 484 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 UROSP10746 265 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 SPTBP11277 2137 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 CDH1P12830 882 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 HGFP14210 728 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 NPPBP16860 134 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 HMOX2P30519 316 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 HALP42357 657 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 CTSKP43235 329 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 NAA20P61599 178 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 UBE2IP63279 158 aaKnown RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 BNIP3Q12983 259 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 DOC2AQ14183 400 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 GPR18Q14330 331 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ABRAXAS2Q15018 415 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ANGPT1Q15389 498 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 LPAL2Q16609 132 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 CPSF6Q16630 551 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMC6-204ENST00000428868 DEFB133Q30KQ1 61 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 SGO1Q5FBB7 561 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 XKR7Q5GH72 579 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 NXNQ6DKJ4 435 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 CAPN13Q6MZZ7 669 aaPredicted RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 METTL2BQ6P1Q9 378 aaKnown RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 IYDQ6PHW0 289 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 TRPM8Q7Z2W7 1104 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 TMPRSS11BQ86T26 416 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 MYLK4Q86YV6 388 aaPredicted RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 DCP2Q8IU60 420 aaKnown RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 DDIASQ8IXT1 998 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ZNF740Q8NDX6 193 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ZNF548Q8NEK5 533 aaPredicted RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 HMGCLL1Q8TB92 370 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 METTL6Q8TCB7 284 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ATL1Q8WXF7 558 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 PIGKQ92643 395 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ERP27Q96DN0 273 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 MTFMTQ96DP5 389 aaKnown RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 C19orf60Q96EN9 201 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 RILPQ96NA2 401 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 CATSPER2Q96P56 530 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ZNF385DQ9H6B1 395 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 KIR3DX1Q9H7L2 352 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 MVB12BQ9H7P6 319 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 ACTR8Q9H981 624 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 TCF7L2Q9NQB0 619 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 CCDC177Q9NQR7 707 aaPredicted RBP8.58□□□□□ -1.04
SMC6-204ENST00000428868 VTI1BQ9UEU0 232 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 TAC3Q9UHF0 121 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 POLG2Q9UHN1 485 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 FBXO4Q9UKT5 387 aa8.58□□□□□ -1.04
SMC6-204ENST00000428868 A0A1B0GTW7 788 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 MANBAO00462 879 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 BTN3A3O00478 584 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 CLGNO14967 610 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 CASC3O15234 703 aaKnown RBP8.57□□□□□ -1.04
SMC6-204ENST00000428868 YY2O15391 372 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 NOBOXO60393 691 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 CRCPO75575 148 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 PIAS2O75928 621 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 WFS1O76024 890 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 SNUPNO95149 360 aaKnown RBP8.57□□□□□ -1.04
SMC6-204ENST00000428868 CLDN9O95484 217 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 PDYNP01213 254 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 RPN2P04844 631 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 ENO1P06733 434 aaKnown RBP8.57□□□□□ -1.04
SMC6-204ENST00000428868 EBLN1P0CF75 366 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 GIMD1P0DJR0 217 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 MYF5P13349 255 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 HOXB3P14651 431 aaPredicted RBP8.57□□□□□ -1.04
SMC6-204ENST00000428868 RAB28P51157 221 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 AFF3P51826 1226 aaKnown RBP8.57□□□□□ -1.04
SMC6-204ENST00000428868 NEK2P51955 445 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 HK2P52789 917 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 C21orf59P57076 290 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 PPP1CAP62136 330 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 IRF8Q02556 426 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 KRT33BQ14525 404 aa8.57□□□□□ -1.04
SMC6-204ENST00000428868 ZRSR2Q15696 482 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms