RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 E9PQ18 207 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 F5H5T6 163 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SLC28A1O00337 649 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 BCKDKO14874 412 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 RGS14O43566 566 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 MRPS14O60783 128 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 CRYZL1O95825 349 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ANGPTL1O95841 491 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PTTG1O95997 202 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ABCB1P08183 1280 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 PRKCAP17252 672 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PTPN6P29350 595 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 EIF2DP41214 584 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 MASP1P48740 699 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CLK3P49761 638 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 CDH4P55283 916 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PRMT2P55345 433 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 KEAP1Q14145 624 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 MRPL58Q14197 206 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 GBX1Q14549 363 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ZNF181Q2M3W8 571 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 ZRANB3Q5FWF4 1079 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 CAPN13Q6MZZ7 669 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 KIAA1841Q6NSI8 718 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 TUBA3EQ6PEY2 450 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 TMC5Q6UXY8 1006 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 LRRC8DQ7L1W4 858 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 STK40Q8N2I9 435 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CLIP4Q8N3C7 705 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ASCC1Q8N9N2 400 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 SLAIN1Q8ND83 568 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 LPCAT1Q8NF37 534 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 NDNFQ8TB73 568 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 MCOLN3Q8TDD5 553 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 GPR152Q8TDT2 470 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PYURFQ96I23 114 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SIGLEC11Q96RL6 698 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 TBCDQ9BTW9 1192 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 DPY30Q9C005 99 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 HMX1Q9NP08 348 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 EXD2Q9NVH0 621 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ERVK-18Q9QC07 812 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 INVSQ9Y283 1065 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PCDHB14Q9Y5E9 798 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PCDHB1Q9Y5F3 818 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 RAI2Q9Y5P3 530 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 NUP214P35658 2090 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 ARVCFO00192 962 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 TOR1BO14657 336 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 RAD51BO15315 384 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 STX7O15400 261 aaKnown RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 TEX28O15482 410 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 ACSL4O60488 711 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 MITFO75030 526 aaPredicted RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 ERN1O75460 977 aaKnown RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 UPK1BO75841 260 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 RECQL5O94762 991 aaPredicted RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 SERPINA1P01009 418 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 KRT8P05787 483 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 RPS3P23396 243 aaKnown RBP eCLIP8.6□□□□□ -1.03
CDH13-202ENST00000428848 GNPDA1P46926 289 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 KCNQ1P51787 676 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 COPZ1P61923 177 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 KRR1Q13601 381 aaKnown RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 PTPRRQ15256 657 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 NPTX1Q15818 432 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 CARD16Q5EG05 197 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 CLLU1OSQ5K130 101 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 KDM4DQ6B0I6 523 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 RNF19BQ6ZMZ0 732 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 ANKS3Q6ZW76 656 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 PHACTR4Q8IZ21 702 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 LIX1Q8N485 282 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 KRTCAP2Q8N6L1 136 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 ATAD1Q8NBU5 361 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 SIMC1Q8NDZ2 872 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 SETD9Q8NE22 299 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 HCAR2Q8TDS4 363 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 UBTD2Q8WUN7 234 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 RORBQ92753 470 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 USP7Q93009 1102 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 HHIPQ96QV1 700 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 TMEM175Q9BSA9 504 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 NTMT1Q9BV86 223 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 EMILIN2Q9BXX0 1053 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 KCNH6Q9H252 994 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 NSUN3Q9H649 340 aaKnown RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 CCSER2Q9H7U1 834 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 BPIFA1Q9NP55 256 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 CCDC177Q9NQR7 707 aaPredicted RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
CDH13-202ENST00000428848 C1orf109Q9NX04 203 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 IL17CQ9P0M4 197 aa8.6□□□□□ -1.03
CDH13-202ENST00000428848 TRPS1Q9UHF7 1281 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms